Protein–RNA interactions for Protein: P13521

SCG2, Secretogranin-2, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2P13521 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC20.22■□□□□ 0.83
SCG2P13521 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCG2P13521 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCG2P13521 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SCG2P13521 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCG2P13521 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCG2P13521 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
SCG2P13521 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SCG2P13521 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCG2P13521 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
SCG2P13521 AKR1C7P-201ENST00000305623 895 ntBASIC20.22■□□□□ 0.83
SCG2P13521 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SCG2P13521 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCG2P13521 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.22■□□□□ 0.83
SCG2P13521 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.22■□□□□ 0.83
SCG2P13521 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC20.22■□□□□ 0.83
SCG2P13521 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.22■□□□□ 0.83
SCG2P13521 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC20.22■□□□□ 0.83
SCG2P13521 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.22■□□□□ 0.83
SCG2P13521 LINC01711-201ENST00000598340 967 ntBASIC20.22■□□□□ 0.83
SCG2P13521 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SCG2P13521 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.22■□□□□ 0.83
SCG2P13521 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCG2P13521 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCG2P13521 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SCG2P13521 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCG2P13521 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCG2P13521 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.21■□□□□ 0.83
SCG2P13521 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SCG2P13521 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
SCG2P13521 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SCG2P13521 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCG2P13521 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
SCG2P13521 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
SCG2P13521 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCG2P13521 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCG2P13521 KLF4P1-201ENST00000412782 1185 ntBASIC20.21■□□□□ 0.83
SCG2P13521 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.21■□□□□ 0.83
SCG2P13521 FAAHP1-202ENST00000446499 1238 ntBASIC20.21■□□□□ 0.83
SCG2P13521 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.21■□□□□ 0.83
SCG2P13521 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
SCG2P13521 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.21■□□□□ 0.83
SCG2P13521 TK1-204ENST00000590430 683 ntTSL 3 BASIC20.21■□□□□ 0.83
SCG2P13521 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCG2P13521 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC20.21■□□□□ 0.83
SCG2P13521 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SCG2P13521 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
SCG2P13521 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SCG2P13521 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCG2P13521 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCG2P13521 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCG2P13521 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCG2P13521 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC20.21■□□□□ 0.83
SCG2P13521 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCG2P13521 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCG2P13521 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.21■□□□□ 0.83
SCG2P13521 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.21■□□□□ 0.83
SCG2P13521 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCG2P13521 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SCG2P13521 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCG2P13521 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.21■□□□□ 0.83
SCG2P13521 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
SCG2P13521 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
SCG2P13521 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SCG2P13521 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.2■□□□□ 0.82
SCG2P13521 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SCG2P13521 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SCG2P13521 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
SCG2P13521 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC20.2■□□□□ 0.82
SCG2P13521 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SCG2P13521 AC003669.1-201ENST00000334569 611 ntBASIC20.2■□□□□ 0.82
SCG2P13521 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SCG2P13521 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SCG2P13521 RBM17P3-201ENST00000417687 1192 ntBASIC20.2■□□□□ 0.82
SCG2P13521 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SCG2P13521 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SCG2P13521 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SCG2P13521 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SCG2P13521 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.2■□□□□ 0.82
SCG2P13521 PP12613-201ENST00000424958 2230 ntBASIC20.2■□□□□ 0.82
SCG2P13521 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.2■□□□□ 0.82
SCG2P13521 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SCG2P13521 HCG11-201ENST00000411553 5696 ntBASIC20.2■□□□□ 0.82
SCG2P13521 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.2■□□□□ 0.82
SCG2P13521 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC20.2■□□□□ 0.82
SCG2P13521 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC20.2■□□□□ 0.82
SCG2P13521 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
SCG2P13521 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SCG2P13521 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
SCG2P13521 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SCG2P13521 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SCG2P13521 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SCG2P13521 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SCG2P13521 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
SCG2P13521 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC20.19■□□□□ 0.82
SCG2P13521 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SCG2P13521 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.19■□□□□ 0.82
SCG2P13521 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SCG2P13521 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.19■□□□□ 0.82
SCG2P13521 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms