Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
BMP4P12644 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
BMP4P12644 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.19■□□□□ 0.18
BMP4P12644 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
BMP4P12644 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BMP4P12644 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
BMP4P12644 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
BMP4P12644 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
BMP4P12644 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BMP4P12644 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.19■□□□□ 0.18
BMP4P12644 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
BMP4P12644 KRT8P45-201ENST00000414328 1447 ntBASIC16.19■□□□□ 0.18
BMP4P12644 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
BMP4P12644 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
BMP4P12644 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.19■□□□□ 0.18
BMP4P12644 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BMP4P12644 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
BMP4P12644 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
BMP4P12644 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BMP4P12644 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BMP4P12644 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
BMP4P12644 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.18■□□□□ 0.18
BMP4P12644 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
BMP4P12644 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.18■□□□□ 0.18
BMP4P12644 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BMP4P12644 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BMP4P12644 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.18■□□□□ 0.18
BMP4P12644 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
BMP4P12644 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BMP4P12644 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
BMP4P12644 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BMP4P12644 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
BMP4P12644 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BMP4P12644 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
BMP4P12644 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.18■□□□□ 0.18
BMP4P12644 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BMP4P12644 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BMP4P12644 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.18■□□□□ 0.18
BMP4P12644 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BMP4P12644 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BMP4P12644 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.18■□□□□ 0.18
BMP4P12644 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.18■□□□□ 0.18
BMP4P12644 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.18■□□□□ 0.18
BMP4P12644 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.18■□□□□ 0.18
BMP4P12644 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.18■□□□□ 0.18
BMP4P12644 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.18■□□□□ 0.18
BMP4P12644 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
BMP4P12644 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
BMP4P12644 AC011558.1-201ENST00000623459 338 ntBASIC16.18■□□□□ 0.18
BMP4P12644 AC068587.9-201ENST00000641814 219 ntBASIC16.18■□□□□ 0.18
BMP4P12644 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
BMP4P12644 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
BMP4P12644 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BMP4P12644 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.18■□□□□ 0.18
BMP4P12644 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.18■□□□□ 0.18
BMP4P12644 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.18■□□□□ 0.18
BMP4P12644 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
BMP4P12644 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
BMP4P12644 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
BMP4P12644 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.18■□□□□ 0.18
BMP4P12644 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
BMP4P12644 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.17■□□□□ 0.18
BMP4P12644 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
BMP4P12644 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
BMP4P12644 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
BMP4P12644 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
BMP4P12644 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BMP4P12644 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BMP4P12644 AC092850.2-201ENST00000623821 2697 ntBASIC16.17■□□□□ 0.18
BMP4P12644 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
BMP4P12644 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BMP4P12644 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.17■□□□□ 0.18
BMP4P12644 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.17■□□□□ 0.18
BMP4P12644 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.17■□□□□ 0.18
BMP4P12644 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.17■□□□□ 0.18
BMP4P12644 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.17■□□□□ 0.18
BMP4P12644 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
BMP4P12644 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BMP4P12644 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
BMP4P12644 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BMP4P12644 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.17■□□□□ 0.18
BMP4P12644 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.17■□□□□ 0.18
BMP4P12644 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
BMP4P12644 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
BMP4P12644 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BMP4P12644 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.17■□□□□ 0.18
BMP4P12644 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
BMP4P12644 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.16■□□□□ 0.18
BMP4P12644 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
BMP4P12644 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
BMP4P12644 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.16■□□□□ 0.18
BMP4P12644 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
BMP4P12644 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
BMP4P12644 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
BMP4P12644 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
BMP4P12644 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
BMP4P12644 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
BMP4P12644 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
BMP4P12644 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.16■□□□□ 0.18
BMP4P12644 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms