Protein–RNA interactions for Protein: P0C0S8

HIST1H2AG, Histone H2A type 1, humanhuman

Predicted RBP Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AGP0C0S8 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
HIST1H2AGP0C0S8 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.27■□□□□ 0.35
HIST1H2AGP0C0S8 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HIST1H2AGP0C0S8 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIST1H2AGP0C0S8 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
HIST1H2AGP0C0S8 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIST1H2AGP0C0S8 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIST1H2AGP0C0S8 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HIST1H2AGP0C0S8 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIST1H2AGP0C0S8 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIST1H2AGP0C0S8 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HIST1H2AGP0C0S8 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIST1H2AGP0C0S8 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIST1H2AGP0C0S8 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
HIST1H2AGP0C0S8 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
HIST1H2AGP0C0S8 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIST1H2AGP0C0S8 COX5BP2-201ENST00000392354 334 ntBASIC17.26■□□□□ 0.35
HIST1H2AGP0C0S8 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.26■□□□□ 0.35
HIST1H2AGP0C0S8 KRT18P35-201ENST00000510488 1269 ntBASIC17.26■□□□□ 0.35
HIST1H2AGP0C0S8 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.26■□□□□ 0.35
HIST1H2AGP0C0S8 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.26■□□□□ 0.35
HIST1H2AGP0C0S8 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HIST1H2AGP0C0S8 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HIST1H2AGP0C0S8 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
HIST1H2AGP0C0S8 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.26■□□□□ 0.35
HIST1H2AGP0C0S8 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.26■□□□□ 0.35
HIST1H2AGP0C0S8 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIST1H2AGP0C0S8 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
HIST1H2AGP0C0S8 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.26■□□□□ 0.35
HIST1H2AGP0C0S8 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIST1H2AGP0C0S8 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIST1H2AGP0C0S8 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIST1H2AGP0C0S8 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIST1H2AGP0C0S8 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIST1H2AGP0C0S8 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.25■□□□□ 0.35
HIST1H2AGP0C0S8 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
HIST1H2AGP0C0S8 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H2AGP0C0S8 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.25■□□□□ 0.35
HIST1H2AGP0C0S8 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H2AGP0C0S8 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
HIST1H2AGP0C0S8 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H2AGP0C0S8 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
HIST1H2AGP0C0S8 AC125634.1-201ENST00000438758 1403 ntBASIC17.25■□□□□ 0.35
HIST1H2AGP0C0S8 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H2AGP0C0S8 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H2AGP0C0S8 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
HIST1H2AGP0C0S8 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
HIST1H2AGP0C0S8 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
HIST1H2AGP0C0S8 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H2AGP0C0S8 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H2AGP0C0S8 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H2AGP0C0S8 MIR1224-201ENST00000408193 85 ntBASIC17.25■□□□□ 0.35
HIST1H2AGP0C0S8 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H2AGP0C0S8 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H2AGP0C0S8 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H2AGP0C0S8 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.25■□□□□ 0.35
HIST1H2AGP0C0S8 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.25■□□□□ 0.35
HIST1H2AGP0C0S8 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H2AGP0C0S8 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H2AGP0C0S8 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H2AGP0C0S8 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H2AGP0C0S8 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.25■□□□□ 0.35
HIST1H2AGP0C0S8 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H2AGP0C0S8 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H2AGP0C0S8 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.25■□□□□ 0.35
HIST1H2AGP0C0S8 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H2AGP0C0S8 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H2AGP0C0S8 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H2AGP0C0S8 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIST1H2AGP0C0S8 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIST1H2AGP0C0S8 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.24■□□□□ 0.35
HIST1H2AGP0C0S8 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIST1H2AGP0C0S8 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIST1H2AGP0C0S8 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIST1H2AGP0C0S8 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.24■□□□□ 0.35
HIST1H2AGP0C0S8 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIST1H2AGP0C0S8 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HIST1H2AGP0C0S8 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.24■□□□□ 0.35
HIST1H2AGP0C0S8 AC005104.2-201ENST00000427818 678 ntBASIC17.24■□□□□ 0.35
HIST1H2AGP0C0S8 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.24■□□□□ 0.35
HIST1H2AGP0C0S8 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.24■□□□□ 0.35
HIST1H2AGP0C0S8 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.24■□□□□ 0.35
HIST1H2AGP0C0S8 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.24■□□□□ 0.35
HIST1H2AGP0C0S8 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.24■□□□□ 0.35
HIST1H2AGP0C0S8 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.24■□□□□ 0.35
HIST1H2AGP0C0S8 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.24■□□□□ 0.35
HIST1H2AGP0C0S8 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.24■□□□□ 0.35
HIST1H2AGP0C0S8 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.24■□□□□ 0.35
HIST1H2AGP0C0S8 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HIST1H2AGP0C0S8 AC091076.1-201ENST00000610741 619 ntBASIC17.24■□□□□ 0.35
HIST1H2AGP0C0S8 AC010331.1-201ENST00000611423 582 ntBASIC17.24■□□□□ 0.35
HIST1H2AGP0C0S8 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.24■□□□□ 0.35
HIST1H2AGP0C0S8 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.24■□□□□ 0.35
HIST1H2AGP0C0S8 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.24■□□□□ 0.35
HIST1H2AGP0C0S8 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIST1H2AGP0C0S8 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIST1H2AGP0C0S8 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.24■□□□□ 0.35
HIST1H2AGP0C0S8 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.24■□□□□ 0.35
HIST1H2AGP0C0S8 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.24■□□□□ 0.35
HIST1H2AGP0C0S8 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms