Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXC6P09630 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HOXC6P09630 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HOXC6P09630 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXC6P09630 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
HOXC6P09630 CALY-203ENST00000368558 825 ntTSL 5 BASIC19.75■□□□□ 0.75
HOXC6P09630 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXC6P09630 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.75■□□□□ 0.75
HOXC6P09630 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXC6P09630 AC004461.1-201ENST00000412461 403 ntBASIC19.75■□□□□ 0.75
HOXC6P09630 ACTG1P4-201ENST00000425123 1122 ntBASIC19.75■□□□□ 0.75
HOXC6P09630 HLA-J-203ENST00000494367 1087 ntBASIC19.75■□□□□ 0.75
HOXC6P09630 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HOXC6P09630 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.75■□□□□ 0.75
HOXC6P09630 RPL28-205ENST00000558131 444 ntTSL 5 BASIC19.75■□□□□ 0.75
HOXC6P09630 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXC6P09630 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.75■□□□□ 0.75
HOXC6P09630 REXO1L3P-201ENST00000622202 1288 ntBASIC19.75■□□□□ 0.75
HOXC6P09630 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
HOXC6P09630 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXC6P09630 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXC6P09630 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.75■□□□□ 0.75
HOXC6P09630 AC093677.2-201ENST00000600169 1863 ntBASIC19.75■□□□□ 0.75
HOXC6P09630 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXC6P09630 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.75■□□□□ 0.75
HOXC6P09630 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HOXC6P09630 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.75■□□□□ 0.75
HOXC6P09630 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC6P09630 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC6P09630 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC6P09630 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC6P09630 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC6P09630 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC6P09630 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC6P09630 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
HOXC6P09630 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
HOXC6P09630 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC6P09630 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
HOXC6P09630 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC6P09630 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC6P09630 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC19.74■□□□□ 0.75
HOXC6P09630 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC19.74■□□□□ 0.75
HOXC6P09630 FAM185BP-201ENST00000443595 716 ntBASIC19.74■□□□□ 0.75
HOXC6P09630 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.74■□□□□ 0.75
HOXC6P09630 AC068137.2-201ENST00000605408 478 ntBASIC19.74■□□□□ 0.75
HOXC6P09630 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.74■□□□□ 0.75
HOXC6P09630 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC6P09630 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.74■□□□□ 0.75
HOXC6P09630 AC104581.1-202ENST00000635932 2618 ntBASIC19.74■□□□□ 0.75
HOXC6P09630 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC6P09630 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.74■□□□□ 0.75
HOXC6P09630 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC6P09630 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC6P09630 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC6P09630 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC6P09630 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.74■□□□□ 0.75
HOXC6P09630 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.74■□□□□ 0.75
HOXC6P09630 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.74■□□□□ 0.75
HOXC6P09630 AC009113.1-201ENST00000570267 2443 ntBASIC19.74■□□□□ 0.75
HOXC6P09630 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC6P09630 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC19.74■□□□□ 0.75
HOXC6P09630 AL590787.1-201ENST00000568856 1315 ntBASIC19.74■□□□□ 0.75
HOXC6P09630 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC6P09630 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
HOXC6P09630 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC6P09630 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.73■□□□□ 0.75
HOXC6P09630 PI4KAP1-204ENST00000612579 1703 ntBASIC19.73■□□□□ 0.75
HOXC6P09630 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXC6P09630 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXC6P09630 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXC6P09630 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
HOXC6P09630 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXC6P09630 AL020996.1-203ENST00000536896 2307 ntBASIC19.73■□□□□ 0.75
HOXC6P09630 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
HOXC6P09630 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC19.73■□□□□ 0.75
HOXC6P09630 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.73■□□□□ 0.75
HOXC6P09630 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.73■□□□□ 0.75
HOXC6P09630 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HOXC6P09630 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
HOXC6P09630 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC19.73■□□□□ 0.75
HOXC6P09630 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.73■□□□□ 0.75
HOXC6P09630 AL096865.1-201ENST00000606796 927 ntBASIC19.73■□□□□ 0.75
HOXC6P09630 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC19.73■□□□□ 0.75
HOXC6P09630 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXC6P09630 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXC6P09630 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
HOXC6P09630 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
HOXC6P09630 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
HOXC6P09630 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXC6P09630 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXC6P09630 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXC6P09630 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXC6P09630 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXC6P09630 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.73■□□□□ 0.75
HOXC6P09630 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
HOXC6P09630 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXC6P09630 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXC6P09630 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.72■□□□□ 0.75
HOXC6P09630 AC090164.3-201ENST00000610780 2143 ntBASIC19.72■□□□□ 0.75
HOXC6P09630 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms