Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RETP07949 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RETP07949 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RETP07949 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.73■□□□□ 0.43
RETP07949 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.73■□□□□ 0.43
RETP07949 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RETP07949 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RETP07949 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RETP07949 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.73■□□□□ 0.43
RETP07949 AC073621.1-201ENST00000392730 636 ntBASIC17.73■□□□□ 0.43
RETP07949 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.73■□□□□ 0.43
RETP07949 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.73■□□□□ 0.43
RETP07949 BX005266.1-201ENST00000473402 457 ntBASIC17.73■□□□□ 0.43
RETP07949 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.73■□□□□ 0.43
RETP07949 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.73■□□□□ 0.43
RETP07949 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.73■□□□□ 0.43
RETP07949 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.73■□□□□ 0.43
RETP07949 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RETP07949 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RETP07949 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RETP07949 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
RETP07949 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RETP07949 HEIH-201ENST00000623091 1652 ntBASIC17.73■□□□□ 0.43
RETP07949 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RETP07949 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RETP07949 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RETP07949 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.72■□□□□ 0.43
RETP07949 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RETP07949 AC079776.2-201ENST00000641154 1609 ntBASIC17.72■□□□□ 0.43
RETP07949 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RETP07949 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RETP07949 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RETP07949 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
RETP07949 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.72■□□□□ 0.43
RETP07949 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RETP07949 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
RETP07949 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
RETP07949 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RETP07949 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.72■□□□□ 0.43
RETP07949 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.72■□□□□ 0.43
RETP07949 CRYGEP-201ENST00000412192 528 ntBASIC17.72■□□□□ 0.43
RETP07949 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.72■□□□□ 0.43
RETP07949 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.72■□□□□ 0.43
RETP07949 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.72■□□□□ 0.43
RETP07949 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RETP07949 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
RETP07949 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RETP07949 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RETP07949 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RETP07949 ELL2P1-201ENST00000413990 1906 ntBASIC17.72■□□□□ 0.43
RETP07949 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RETP07949 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.72■□□□□ 0.43
RETP07949 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RETP07949 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RETP07949 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.72■□□□□ 0.43
RETP07949 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.71■□□□□ 0.43
RETP07949 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RETP07949 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RETP07949 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RETP07949 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RETP07949 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
RETP07949 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RETP07949 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RETP07949 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RETP07949 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
RETP07949 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RETP07949 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
RETP07949 CEND1P1-201ENST00000451006 455 ntBASIC17.71■□□□□ 0.43
RETP07949 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.71■□□□□ 0.43
RETP07949 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.71■□□□□ 0.43
RETP07949 AL096865.1-201ENST00000606796 927 ntBASIC17.71■□□□□ 0.43
RETP07949 AL513190.1-201ENST00000621254 727 ntBASIC17.71■□□□□ 0.43
RETP07949 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.71■□□□□ 0.43
RETP07949 AC092865.6-201ENST00000642101 219 ntBASIC17.71■□□□□ 0.43
RETP07949 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RETP07949 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.71■□□□□ 0.43
RETP07949 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RETP07949 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
RETP07949 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
RETP07949 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RETP07949 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RETP07949 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
RETP07949 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.7■□□□□ 0.42
RETP07949 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RETP07949 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RETP07949 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RETP07949 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.7■□□□□ 0.42
RETP07949 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RETP07949 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
RETP07949 KRT18P65-201ENST00000439811 1286 ntBASIC17.7■□□□□ 0.42
RETP07949 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.7■□□□□ 0.42
RETP07949 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RETP07949 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
RETP07949 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.7■□□□□ 0.42
RETP07949 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.7■□□□□ 0.42
RETP07949 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RETP07949 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.7■□□□□ 0.42
RETP07949 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
RETP07949 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.7■□□□□ 0.42
RETP07949 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms