Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RB1P06400 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RB1P06400 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RB1P06400 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RB1P06400 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RB1P06400 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.48■□□□□ 0.55
RB1P06400 ADH5P3-201ENST00000433842 1137 ntBASIC18.48■□□□□ 0.55
RB1P06400 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.48■□□□□ 0.55
RB1P06400 TAF8-206ENST00000472818 719 ntTSL 2 BASIC18.48■□□□□ 0.55
RB1P06400 SLBP-205ENST00000488267 987 ntTSL 2 BASIC18.48■□□□□ 0.55
RB1P06400 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RB1P06400 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.48■□□□□ 0.55
RB1P06400 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.48■□□□□ 0.55
RB1P06400 AC026120.1-201ENST00000611536 926 ntBASIC18.48■□□□□ 0.55
RB1P06400 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
RB1P06400 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.48■□□□□ 0.55
RB1P06400 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.48■□□□□ 0.55
RB1P06400 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RB1P06400 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RB1P06400 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RB1P06400 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RB1P06400 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.47■□□□□ 0.55
RB1P06400 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RB1P06400 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RB1P06400 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.47■□□□□ 0.55
RB1P06400 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
RB1P06400 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
RB1P06400 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RB1P06400 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RB1P06400 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RB1P06400 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.47■□□□□ 0.55
RB1P06400 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
RB1P06400 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RB1P06400 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.47■□□□□ 0.55
RB1P06400 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.47■□□□□ 0.55
RB1P06400 AL627223.1-201ENST00000416693 442 ntBASIC18.47■□□□□ 0.55
RB1P06400 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RB1P06400 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.47■□□□□ 0.55
RB1P06400 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.47■□□□□ 0.55
RB1P06400 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.47■□□□□ 0.55
RB1P06400 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.47■□□□□ 0.55
RB1P06400 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.47■□□□□ 0.55
RB1P06400 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
RB1P06400 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RB1P06400 ACTL9-202ENST00000612068 1252 ntBASIC18.47■□□□□ 0.55
RB1P06400 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.47■□□□□ 0.55
RB1P06400 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RB1P06400 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RB1P06400 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RB1P06400 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
RB1P06400 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RB1P06400 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RB1P06400 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RB1P06400 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RB1P06400 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.47■□□□□ 0.55
RB1P06400 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RB1P06400 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RB1P06400 AC009949.1-201ENST00000623048 1830 ntBASIC18.46■□□□□ 0.55
RB1P06400 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RB1P06400 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RB1P06400 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.46■□□□□ 0.55
RB1P06400 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RB1P06400 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
RB1P06400 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.46■□□□□ 0.55
RB1P06400 AC092919.2-201ENST00000623631 1645 ntBASIC18.46■□□□□ 0.55
RB1P06400 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
RB1P06400 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.46■□□□□ 0.55
RB1P06400 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
RB1P06400 PMS2P4-201ENST00000412466 1052 ntBASIC18.46■□□□□ 0.55
RB1P06400 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.46■□□□□ 0.55
RB1P06400 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.46■□□□□ 0.55
RB1P06400 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
RB1P06400 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.46■□□□□ 0.55
RB1P06400 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC18.46■□□□□ 0.55
RB1P06400 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RB1P06400 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RB1P06400 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.46■□□□□ 0.55
RB1P06400 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC18.46■□□□□ 0.55
RB1P06400 Z92544.3-201ENST00000624747 417 ntBASIC18.46■□□□□ 0.55
RB1P06400 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.46■□□□□ 0.55
RB1P06400 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
RB1P06400 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
RB1P06400 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RB1P06400 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RB1P06400 AC129492.6-201ENST00000611383 1305 ntBASIC18.46■□□□□ 0.55
RB1P06400 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RB1P06400 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RB1P06400 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RB1P06400 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RB1P06400 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.45■□□□□ 0.54
RB1P06400 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
RB1P06400 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RB1P06400 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.45■□□□□ 0.54
RB1P06400 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RB1P06400 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RB1P06400 AL671277.1-201ENST00000429656 993 ntBASIC18.45■□□□□ 0.54
RB1P06400 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18.45■□□□□ 0.54
RB1P06400 TIMM8BP1-201ENST00000452384 211 ntBASIC18.45■□□□□ 0.54
RB1P06400 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.45■□□□□ 0.54
RB1P06400 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms