Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHGBP05060 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHGBP05060 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CHGBP05060 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHGBP05060 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC21.09■□□□□ 0.97
CHGBP05060 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHGBP05060 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHGBP05060 HLA-A-201ENST00000376802 1334 ntBASIC21.09■□□□□ 0.97
CHGBP05060 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.09■□□□□ 0.97
CHGBP05060 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHGBP05060 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHGBP05060 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHGBP05060 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC21.09■□□□□ 0.97
CHGBP05060 AC002558.1-201ENST00000488906 803 ntBASIC21.09■□□□□ 0.97
CHGBP05060 AC064862.7-201ENST00000604520 867 ntBASIC21.09■□□□□ 0.97
CHGBP05060 MIR7706-201ENST00000613747 67 ntBASIC21.09■□□□□ 0.97
CHGBP05060 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC21.09■□□□□ 0.97
CHGBP05060 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC21.09■□□□□ 0.97
CHGBP05060 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHGBP05060 AC141586.5-201ENST00000624546 2050 ntBASIC21.09■□□□□ 0.97
CHGBP05060 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHGBP05060 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CHGBP05060 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHGBP05060 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC21.09■□□□□ 0.97
CHGBP05060 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC21.08■□□□□ 0.97
CHGBP05060 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CHGBP05060 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHGBP05060 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CHGBP05060 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CHGBP05060 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHGBP05060 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CHGBP05060 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHGBP05060 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC21.08■□□□□ 0.97
CHGBP05060 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC21.08■□□□□ 0.97
CHGBP05060 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC21.08■□□□□ 0.97
CHGBP05060 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CHGBP05060 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC21.08■□□□□ 0.97
CHGBP05060 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC21.08■□□□□ 0.97
CHGBP05060 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CHGBP05060 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC21.08■□□□□ 0.97
CHGBP05060 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CHGBP05060 AC026471.1-201ENST00000564629 3026 ntBASIC21.08■□□□□ 0.96
CHGBP05060 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC21.08■□□□□ 0.96
CHGBP05060 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CHGBP05060 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CHGBP05060 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CHGBP05060 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CHGBP05060 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHGBP05060 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHGBP05060 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CHGBP05060 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC21.07■□□□□ 0.96
CHGBP05060 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHGBP05060 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHGBP05060 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC21.07■□□□□ 0.96
CHGBP05060 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHGBP05060 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHGBP05060 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC21.07■□□□□ 0.96
CHGBP05060 AC009336.1-201ENST00000608941 1553 ntBASIC21.07■□□□□ 0.96
CHGBP05060 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHGBP05060 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
CHGBP05060 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHGBP05060 KLF4P1-201ENST00000412782 1185 ntBASIC21.07■□□□□ 0.96
CHGBP05060 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CHGBP05060 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC21.07■□□□□ 0.96
CHGBP05060 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC21.07■□□□□ 0.96
CHGBP05060 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC21.07■□□□□ 0.96
CHGBP05060 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC21.07■□□□□ 0.96
CHGBP05060 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC21.07■□□□□ 0.96
CHGBP05060 COPE-211ENST00000600932 1144 ntTSL 5 BASIC21.07■□□□□ 0.96
CHGBP05060 LINC01451-201ENST00000623792 534 ntBASIC21.07■□□□□ 0.96
CHGBP05060 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC21.07■□□□□ 0.96
CHGBP05060 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC21.07■□□□□ 0.96
CHGBP05060 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CHGBP05060 TPR-209ENST00000613151 2478 ntTSL 5 BASIC21.07■□□□□ 0.96
CHGBP05060 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHGBP05060 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC21.07■□□□□ 0.96
CHGBP05060 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHGBP05060 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHGBP05060 AC012313.1-201ENST00000593393 3059 ntBASIC21.07■□□□□ 0.96
CHGBP05060 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHGBP05060 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CHGBP05060 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHGBP05060 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHGBP05060 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHGBP05060 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC21.06■□□□□ 0.96
CHGBP05060 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC21.06■□□□□ 0.96
CHGBP05060 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CHGBP05060 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHGBP05060 SIGLEC16-201ENST00000599858 1437 ntBASIC21.06■□□□□ 0.96
CHGBP05060 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CHGBP05060 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CHGBP05060 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC21.06■□□□□ 0.96
CHGBP05060 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHGBP05060 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC21.06■□□□□ 0.96
CHGBP05060 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC21.06■□□□□ 0.96
CHGBP05060 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC21.06■□□□□ 0.96
CHGBP05060 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHGBP05060 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CHGBP05060 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC21.06■□□□□ 0.96
CHGBP05060 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms