Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRGV3P03979 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRGV3P03979 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRGV3P03979 AC125634.1-201ENST00000438758 1403 ntBASIC13.87□□□□□ -0.19
TRGV3P03979 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC13.87□□□□□ -0.19
TRGV3P03979 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC13.87□□□□□ -0.19
TRGV3P03979 PODN-203ENST00000395871 2744 ntTSL 5 BASIC13.87□□□□□ -0.19
TRGV3P03979 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRGV3P03979 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRGV3P03979 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC13.87□□□□□ -0.19
TRGV3P03979 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC13.87□□□□□ -0.19
TRGV3P03979 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC13.87□□□□□ -0.19
TRGV3P03979 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRGV3P03979 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TRGV3P03979 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
TRGV3P03979 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRGV3P03979 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRGV3P03979 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC13.87□□□□□ -0.19
TRGV3P03979 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC13.87□□□□□ -0.19
TRGV3P03979 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRGV3P03979 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC13.86□□□□□ -0.19
TRGV3P03979 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRGV3P03979 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC13.86□□□□□ -0.19
TRGV3P03979 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRGV3P03979 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
TRGV3P03979 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC13.86□□□□□ -0.19
TRGV3P03979 NSUN5P1-202ENST00000421140 1535 ntBASIC13.86□□□□□ -0.19
TRGV3P03979 NSUN5P2-203ENST00000457352 1529 ntBASIC13.86□□□□□ -0.19
TRGV3P03979 BX276092.7-203ENST00000637198 1536 ntBASIC13.86□□□□□ -0.19
TRGV3P03979 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRGV3P03979 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC13.86□□□□□ -0.19
TRGV3P03979 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC13.86□□□□□ -0.19
TRGV3P03979 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRGV3P03979 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRGV3P03979 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRGV3P03979 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TRGV3P03979 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRGV3P03979 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRGV3P03979 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC13.86□□□□□ -0.19
TRGV3P03979 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC13.86□□□□□ -0.19
TRGV3P03979 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC13.86□□□□□ -0.19
TRGV3P03979 AC096582.2-201ENST00000510860 516 ntBASIC13.86□□□□□ -0.19
TRGV3P03979 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC13.86□□□□□ -0.19
TRGV3P03979 AC009533.2-201ENST00000543664 586 ntBASIC13.86□□□□□ -0.19
TRGV3P03979 AP005901.3-202ENST00000581653 237 ntBASIC13.86□□□□□ -0.19
TRGV3P03979 AC099336.1-202ENST00000602961 463 ntBASIC13.86□□□□□ -0.19
TRGV3P03979 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TRGV3P03979 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC13.86□□□□□ -0.19
TRGV3P03979 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRGV3P03979 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRGV3P03979 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRGV3P03979 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC13.86□□□□□ -0.19
TRGV3P03979 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC13.86□□□□□ -0.19
TRGV3P03979 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC13.86□□□□□ -0.19
TRGV3P03979 GNAS-203ENST00000306120 1878 ntBASIC13.86□□□□□ -0.19
TRGV3P03979 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC13.86□□□□□ -0.19
TRGV3P03979 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC13.86□□□□□ -0.19
TRGV3P03979 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
TRGV3P03979 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC13.86□□□□□ -0.19
TRGV3P03979 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
TRGV3P03979 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
TRGV3P03979 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC13.86□□□□□ -0.19
TRGV3P03979 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
TRGV3P03979 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRGV3P03979 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRGV3P03979 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRGV3P03979 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TRGV3P03979 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRGV3P03979 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TRGV3P03979 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRGV3P03979 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRGV3P03979 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC13.85□□□□□ -0.19
TRGV3P03979 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRGV3P03979 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRGV3P03979 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRGV3P03979 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC13.85□□□□□ -0.19
TRGV3P03979 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TRGV3P03979 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRGV3P03979 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRGV3P03979 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRGV3P03979 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRGV3P03979 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRGV3P03979 AC134043.2-201ENST00000624206 2238 ntBASIC13.85□□□□□ -0.19
TRGV3P03979 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRGV3P03979 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC13.85□□□□□ -0.19
TRGV3P03979 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC13.85□□□□□ -0.19
TRGV3P03979 AC096633.1-201ENST00000422446 749 ntBASIC13.85□□□□□ -0.19
TRGV3P03979 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC13.85□□□□□ -0.19
TRGV3P03979 DANCR-204ENST00000444958 709 ntTSL 3 BASIC13.85□□□□□ -0.19
TRGV3P03979 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
TRGV3P03979 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC13.85□□□□□ -0.19
TRGV3P03979 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRGV3P03979 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC13.85□□□□□ -0.19
TRGV3P03979 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
TRGV3P03979 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRGV3P03979 AL138831.2-201ENST00000606564 490 ntBASIC13.85□□□□□ -0.19
TRGV3P03979 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC13.85□□□□□ -0.19
TRGV3P03979 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC13.85□□□□□ -0.19
TRGV3P03979 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TRGV3P03979 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms