Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.9■□□□□ 0.62
HLA-DRAP01903 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DRAP01903 MYCLP1-201ENST00000372451 1075 ntBASIC18.9■□□□□ 0.62
HLA-DRAP01903 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.9■□□□□ 0.62
HLA-DRAP01903 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DRAP01903 STK25P1-201ENST00000585406 838 ntBASIC18.9■□□□□ 0.62
HLA-DRAP01903 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.9■□□□□ 0.62
HLA-DRAP01903 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.9■□□□□ 0.62
HLA-DRAP01903 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DRAP01903 LETM1P2-201ENST00000597330 2178 ntBASIC18.9■□□□□ 0.62
HLA-DRAP01903 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.9■□□□□ 0.62
HLA-DRAP01903 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DRAP01903 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
HLA-DRAP01903 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
HLA-DRAP01903 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DRAP01903 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DRAP01903 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.9■□□□□ 0.62
HLA-DRAP01903 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
HLA-DRAP01903 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
HLA-DRAP01903 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
HLA-DRAP01903 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
HLA-DRAP01903 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DRAP01903 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DRAP01903 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DRAP01903 AC132938.5-201ENST00000624980 1813 ntBASIC18.89■□□□□ 0.61
HLA-DRAP01903 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DRAP01903 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
HLA-DRAP01903 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.89■□□□□ 0.61
HLA-DRAP01903 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.89■□□□□ 0.61
HLA-DRAP01903 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DRAP01903 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.89■□□□□ 0.61
HLA-DRAP01903 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.89■□□□□ 0.61
HLA-DRAP01903 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.89■□□□□ 0.61
HLA-DRAP01903 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.89■□□□□ 0.61
HLA-DRAP01903 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.89■□□□□ 0.61
HLA-DRAP01903 AC132008.2-207ENST00000454517 770 ntBASIC18.89■□□□□ 0.61
HLA-DRAP01903 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.89■□□□□ 0.61
HLA-DRAP01903 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.89■□□□□ 0.61
HLA-DRAP01903 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.89■□□□□ 0.61
HLA-DRAP01903 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.89■□□□□ 0.61
HLA-DRAP01903 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.89■□□□□ 0.61
HLA-DRAP01903 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.89■□□□□ 0.61
HLA-DRAP01903 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
HLA-DRAP01903 AC073592.5-201ENST00000624854 528 ntBASIC18.89■□□□□ 0.61
HLA-DRAP01903 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.89■□□□□ 0.61
HLA-DRAP01903 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.89■□□□□ 0.61
HLA-DRAP01903 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DRAP01903 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
HLA-DRAP01903 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
HLA-DRAP01903 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
HLA-DRAP01903 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
HLA-DRAP01903 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.89■□□□□ 0.61
HLA-DRAP01903 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DRAP01903 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DRAP01903 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DRAP01903 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DRAP01903 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DRAP01903 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.88■□□□□ 0.61
HLA-DRAP01903 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DRAP01903 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
HLA-DRAP01903 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DRAP01903 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DRAP01903 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DRAP01903 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DRAP01903 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.88■□□□□ 0.61
HLA-DRAP01903 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.88■□□□□ 0.61
HLA-DRAP01903 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DRAP01903 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DRAP01903 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.88■□□□□ 0.61
HLA-DRAP01903 ABCD1P5-201ENST00000445663 754 ntBASIC18.88■□□□□ 0.61
HLA-DRAP01903 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.88■□□□□ 0.61
HLA-DRAP01903 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.88■□□□□ 0.61
HLA-DRAP01903 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DRAP01903 AC091304.2-201ENST00000564639 760 ntBASIC18.88■□□□□ 0.61
HLA-DRAP01903 AP000867.4-201ENST00000641616 219 ntBASIC18.88■□□□□ 0.61
HLA-DRAP01903 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DRAP01903 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DRAP01903 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.88■□□□□ 0.61
HLA-DRAP01903 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DRAP01903 PMPCAP1-201ENST00000508114 1576 ntBASIC18.88■□□□□ 0.61
HLA-DRAP01903 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DRAP01903 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DRAP01903 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DRAP01903 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DRAP01903 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DRAP01903 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DRAP01903 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DRAP01903 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DRAP01903 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DRAP01903 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DRAP01903 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DRAP01903 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
HLA-DRAP01903 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DRAP01903 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DRAP01903 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DRAP01903 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DRAP01903 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DRAP01903 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.87■□□□□ 0.61
HLA-DRAP01903 DUSP5P1-201ENST00000441325 1139 ntBASIC18.87■□□□□ 0.61
HLA-DRAP01903 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms