Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.54■□□□□ 0.4
PDGFBP01127 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
PDGFBP01127 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.54■□□□□ 0.4
PDGFBP01127 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.54■□□□□ 0.4
PDGFBP01127 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDGFBP01127 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.54■□□□□ 0.4
PDGFBP01127 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDGFBP01127 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PDGFBP01127 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDGFBP01127 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDGFBP01127 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.54■□□□□ 0.4
PDGFBP01127 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
PDGFBP01127 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
PDGFBP01127 PIN1P1-201ENST00000412108 996 ntBASIC17.54■□□□□ 0.4
PDGFBP01127 MRPS18AP1-201ENST00000414458 589 ntBASIC17.54■□□□□ 0.4
PDGFBP01127 U91328.1-201ENST00000437528 223 ntBASIC17.54■□□□□ 0.4
PDGFBP01127 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.54■□□□□ 0.4
PDGFBP01127 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.54■□□□□ 0.4
PDGFBP01127 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC17.54■□□□□ 0.4
PDGFBP01127 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.54■□□□□ 0.4
PDGFBP01127 AL606495.2-201ENST00000605867 535 ntBASIC17.54■□□□□ 0.4
PDGFBP01127 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.54■□□□□ 0.4
PDGFBP01127 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDGFBP01127 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDGFBP01127 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.54■□□□□ 0.4
PDGFBP01127 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
PDGFBP01127 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDGFBP01127 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDGFBP01127 PHGDH-209ENST00000641074 1780 ntBASIC17.53■□□□□ 0.4
PDGFBP01127 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PDGFBP01127 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.53■□□□□ 0.4
PDGFBP01127 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PDGFBP01127 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDGFBP01127 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDGFBP01127 GNAS-203ENST00000306120 1878 ntBASIC17.53■□□□□ 0.4
PDGFBP01127 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDGFBP01127 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PDGFBP01127 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDGFBP01127 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.53■□□□□ 0.4
PDGFBP01127 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PDGFBP01127 SLC25A6P2-201ENST00000497974 877 ntBASIC17.53■□□□□ 0.4
PDGFBP01127 AC069120.2-201ENST00000524091 540 ntBASIC17.53■□□□□ 0.4
PDGFBP01127 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.53■□□□□ 0.4
PDGFBP01127 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.53■□□□□ 0.4
PDGFBP01127 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.53■□□□□ 0.4
PDGFBP01127 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
PDGFBP01127 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PDGFBP01127 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PDGFBP01127 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.53■□□□□ 0.4
PDGFBP01127 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.53■□□□□ 0.4
PDGFBP01127 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.53■□□□□ 0.4
PDGFBP01127 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PDGFBP01127 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDGFBP01127 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDGFBP01127 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDGFBP01127 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDGFBP01127 UXT-AS1-201ENST00000590504 1525 ntBASIC17.52■□□□□ 0.4
PDGFBP01127 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDGFBP01127 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDGFBP01127 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PDGFBP01127 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDGFBP01127 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PDGFBP01127 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDGFBP01127 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
PDGFBP01127 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDGFBP01127 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.52■□□□□ 0.4
PDGFBP01127 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.52■□□□□ 0.4
PDGFBP01127 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDGFBP01127 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC17.52■□□□□ 0.4
PDGFBP01127 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.52■□□□□ 0.4
PDGFBP01127 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.52■□□□□ 0.4
PDGFBP01127 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.52■□□□□ 0.4
PDGFBP01127 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.52■□□□□ 0.4
PDGFBP01127 IGHV3-71-201ENST00000523324 359 ntBASIC17.52■□□□□ 0.4
PDGFBP01127 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.52■□□□□ 0.4
PDGFBP01127 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.52■□□□□ 0.4
PDGFBP01127 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDGFBP01127 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.52■□□□□ 0.4
PDGFBP01127 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDGFBP01127 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.52■□□□□ 0.39
PDGFBP01127 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.52■□□□□ 0.39
PDGFBP01127 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PDGFBP01127 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PDGFBP01127 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
PDGFBP01127 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PDGFBP01127 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.52■□□□□ 0.39
PDGFBP01127 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
PDGFBP01127 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.51■□□□□ 0.39
PDGFBP01127 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDGFBP01127 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDGFBP01127 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.51■□□□□ 0.39
PDGFBP01127 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PDGFBP01127 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PDGFBP01127 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.51■□□□□ 0.39
PDGFBP01127 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDGFBP01127 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.51■□□□□ 0.39
PDGFBP01127 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDGFBP01127 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDGFBP01127 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
PDGFBP01127 PGF-202ENST00000405431 666 ntTSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms