Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRUB2O95900 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRUB2O95900 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRUB2O95900 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRUB2O95900 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TRUB2O95900 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRUB2O95900 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.42■□□□□ 0.54
TRUB2O95900 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.42■□□□□ 0.54
TRUB2O95900 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.42■□□□□ 0.54
TRUB2O95900 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.42■□□□□ 0.54
TRUB2O95900 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.42■□□□□ 0.54
TRUB2O95900 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.42■□□□□ 0.54
TRUB2O95900 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRUB2O95900 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.42■□□□□ 0.54
TRUB2O95900 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.42■□□□□ 0.54
TRUB2O95900 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRUB2O95900 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRUB2O95900 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.42■□□□□ 0.54
TRUB2O95900 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRUB2O95900 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
TRUB2O95900 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRUB2O95900 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.42■□□□□ 0.54
TRUB2O95900 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRUB2O95900 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRUB2O95900 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRUB2O95900 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
TRUB2O95900 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.41■□□□□ 0.54
TRUB2O95900 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRUB2O95900 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRUB2O95900 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRUB2O95900 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRUB2O95900 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRUB2O95900 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRUB2O95900 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRUB2O95900 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRUB2O95900 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.41■□□□□ 0.54
TRUB2O95900 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRUB2O95900 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.41■□□□□ 0.54
TRUB2O95900 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRUB2O95900 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.41■□□□□ 0.54
TRUB2O95900 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.41■□□□□ 0.54
TRUB2O95900 KRT126P-201ENST00000549467 1181 ntBASIC18.41■□□□□ 0.54
TRUB2O95900 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.41■□□□□ 0.54
TRUB2O95900 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
TRUB2O95900 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRUB2O95900 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
TRUB2O95900 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.41■□□□□ 0.54
TRUB2O95900 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRUB2O95900 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.41■□□□□ 0.54
TRUB2O95900 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRUB2O95900 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRUB2O95900 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRUB2O95900 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.41■□□□□ 0.54
TRUB2O95900 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.41■□□□□ 0.54
TRUB2O95900 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRUB2O95900 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
TRUB2O95900 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRUB2O95900 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRUB2O95900 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
TRUB2O95900 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRUB2O95900 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRUB2O95900 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRUB2O95900 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.4■□□□□ 0.54
TRUB2O95900 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRUB2O95900 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRUB2O95900 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRUB2O95900 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRUB2O95900 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRUB2O95900 CROCCP2-202ENST00000412962 2773 ntBASIC18.4■□□□□ 0.54
TRUB2O95900 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
TRUB2O95900 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.4■□□□□ 0.54
TRUB2O95900 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRUB2O95900 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRUB2O95900 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRUB2O95900 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.4■□□□□ 0.54
TRUB2O95900 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRUB2O95900 AL450487.1-201ENST00000426799 995 ntBASIC18.4■□□□□ 0.54
TRUB2O95900 AC103564.2-201ENST00000432853 1299 ntBASIC18.4■□□□□ 0.54
TRUB2O95900 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.4■□□□□ 0.54
TRUB2O95900 UNC93B7-201ENST00000509439 705 ntBASIC18.4■□□□□ 0.54
TRUB2O95900 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRUB2O95900 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.4■□□□□ 0.54
TRUB2O95900 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.4■□□□□ 0.54
TRUB2O95900 IFNL4P1-201ENST00000607083 540 ntBASIC18.4■□□□□ 0.54
TRUB2O95900 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.4■□□□□ 0.54
TRUB2O95900 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRUB2O95900 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRUB2O95900 AL023806.1-201ENST00000603994 1649 ntBASIC18.4■□□□□ 0.54
TRUB2O95900 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRUB2O95900 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRUB2O95900 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRUB2O95900 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRUB2O95900 LTB4R2-202ENST00000528054 3092 ntBASIC18.4■□□□□ 0.54
TRUB2O95900 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.4■□□□□ 0.54
TRUB2O95900 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRUB2O95900 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.4■□□□□ 0.54
TRUB2O95900 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
TRUB2O95900 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRUB2O95900 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
TRUB2O95900 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.39■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms