Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.53■□□□□ 0.56
RTN3O95197 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.53■□□□□ 0.56
RTN3O95197 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.53■□□□□ 0.56
RTN3O95197 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.53■□□□□ 0.56
RTN3O95197 RNPS1P1-201ENST00000507437 918 ntBASIC18.53■□□□□ 0.56
RTN3O95197 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RTN3O95197 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.53■□□□□ 0.56
RTN3O95197 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.53■□□□□ 0.56
RTN3O95197 SART3-203ENST00000546611 1184 ntBASIC18.53■□□□□ 0.56
RTN3O95197 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.53■□□□□ 0.56
RTN3O95197 AP001005.1-201ENST00000571755 1248 ntBASIC18.53■□□□□ 0.56
RTN3O95197 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.53■□□□□ 0.56
RTN3O95197 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.53■□□□□ 0.56
RTN3O95197 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.53■□□□□ 0.56
RTN3O95197 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
RTN3O95197 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTN3O95197 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RTN3O95197 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.53■□□□□ 0.56
RTN3O95197 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTN3O95197 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
RTN3O95197 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RTN3O95197 SIRPAP1-201ENST00000448467 1770 ntBASIC18.53■□□□□ 0.56
RTN3O95197 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.53■□□□□ 0.56
RTN3O95197 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTN3O95197 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RTN3O95197 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.52■□□□□ 0.56
RTN3O95197 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RTN3O95197 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.52■□□□□ 0.56
RTN3O95197 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.52■□□□□ 0.56
RTN3O95197 HLA-A-201ENST00000376802 1334 ntBASIC18.52■□□□□ 0.56
RTN3O95197 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RTN3O95197 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RTN3O95197 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RTN3O95197 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RTN3O95197 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.52■□□□□ 0.56
RTN3O95197 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RTN3O95197 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RTN3O95197 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RTN3O95197 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.52■□□□□ 0.56
RTN3O95197 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.52■□□□□ 0.56
RTN3O95197 AC018712.1-201ENST00000455767 687 ntBASIC18.52■□□□□ 0.56
RTN3O95197 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.52■□□□□ 0.56
RTN3O95197 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RTN3O95197 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.52■□□□□ 0.56
RTN3O95197 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RTN3O95197 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.52■□□□□ 0.56
RTN3O95197 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
RTN3O95197 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
RTN3O95197 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RTN3O95197 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RTN3O95197 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RTN3O95197 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
RTN3O95197 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.52■□□□□ 0.55
RTN3O95197 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RTN3O95197 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.52■□□□□ 0.55
RTN3O95197 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RTN3O95197 AC079776.2-201ENST00000641154 1609 ntBASIC18.52■□□□□ 0.55
RTN3O95197 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
RTN3O95197 AL353593.2-201ENST00000602529 1483 ntBASIC18.52■□□□□ 0.55
RTN3O95197 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RTN3O95197 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.52■□□□□ 0.55
RTN3O95197 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTN3O95197 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTN3O95197 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTN3O95197 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTN3O95197 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTN3O95197 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RTN3O95197 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTN3O95197 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTN3O95197 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.51■□□□□ 0.55
RTN3O95197 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.51■□□□□ 0.55
RTN3O95197 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTN3O95197 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
RTN3O95197 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTN3O95197 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTN3O95197 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RTN3O95197 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTN3O95197 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTN3O95197 RPS2P28-201ENST00000314255 741 ntBASIC18.51■□□□□ 0.55
RTN3O95197 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
RTN3O95197 AL031284.1-201ENST00000419297 478 ntBASIC18.51■□□□□ 0.55
RTN3O95197 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.51■□□□□ 0.55
RTN3O95197 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.51■□□□□ 0.55
RTN3O95197 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.51■□□□□ 0.55
RTN3O95197 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.51■□□□□ 0.55
RTN3O95197 NKAPP1-205ENST00000585790 367 ntBASIC18.51■□□□□ 0.55
RTN3O95197 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.51■□□□□ 0.55
RTN3O95197 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.51■□□□□ 0.55
RTN3O95197 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTN3O95197 AC073592.5-201ENST00000624854 528 ntBASIC18.51■□□□□ 0.55
RTN3O95197 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.51■□□□□ 0.55
RTN3O95197 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RTN3O95197 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTN3O95197 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTN3O95197 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTN3O95197 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RTN3O95197 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.51■□□□□ 0.55
RTN3O95197 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
RTN3O95197 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
RTN3O95197 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms