Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
USP1O94782 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
USP1O94782 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
USP1O94782 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
USP1O94782 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
USP1O94782 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.83■□□□□ 0.45
USP1O94782 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
USP1O94782 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
USP1O94782 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
USP1O94782 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
USP1O94782 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
USP1O94782 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
USP1O94782 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.83■□□□□ 0.44
USP1O94782 AC092647.4-201ENST00000457211 535 ntBASIC17.83■□□□□ 0.44
USP1O94782 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.83■□□□□ 0.44
USP1O94782 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.83■□□□□ 0.44
USP1O94782 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.83■□□□□ 0.44
USP1O94782 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
USP1O94782 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.83■□□□□ 0.44
USP1O94782 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
USP1O94782 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
USP1O94782 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
USP1O94782 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
USP1O94782 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
USP1O94782 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.83■□□□□ 0.44
USP1O94782 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
USP1O94782 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.83■□□□□ 0.44
USP1O94782 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
USP1O94782 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
USP1O94782 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
USP1O94782 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
USP1O94782 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
USP1O94782 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
USP1O94782 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.83■□□□□ 0.44
USP1O94782 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
USP1O94782 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP1O94782 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.82■□□□□ 0.44
USP1O94782 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
USP1O94782 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.82■□□□□ 0.44
USP1O94782 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP1O94782 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP1O94782 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP1O94782 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
USP1O94782 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP1O94782 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.82■□□□□ 0.44
USP1O94782 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.82■□□□□ 0.44
USP1O94782 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP1O94782 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
USP1O94782 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP1O94782 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.82■□□□□ 0.44
USP1O94782 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP1O94782 AC104076.2-201ENST00000448912 469 ntBASIC17.82■□□□□ 0.44
USP1O94782 VENTXP5-201ENST00000523979 775 ntBASIC17.82■□□□□ 0.44
USP1O94782 AC005332.3-201ENST00000589904 676 ntBASIC17.82■□□□□ 0.44
USP1O94782 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP1O94782 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
USP1O94782 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
USP1O94782 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP1O94782 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP1O94782 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
USP1O94782 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.82■□□□□ 0.44
USP1O94782 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP1O94782 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.81■□□□□ 0.44
USP1O94782 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.81■□□□□ 0.44
USP1O94782 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP1O94782 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP1O94782 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
USP1O94782 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP1O94782 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP1O94782 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP1O94782 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP1O94782 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.81■□□□□ 0.44
USP1O94782 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
USP1O94782 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
USP1O94782 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP1O94782 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP1O94782 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.81■□□□□ 0.44
USP1O94782 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.81■□□□□ 0.44
USP1O94782 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.81■□□□□ 0.44
USP1O94782 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.81■□□□□ 0.44
USP1O94782 DUX4L26-201ENST00000489078 1255 ntBASIC17.81■□□□□ 0.44
USP1O94782 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
USP1O94782 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
USP1O94782 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.81■□□□□ 0.44
USP1O94782 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.81■□□□□ 0.44
USP1O94782 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.81■□□□□ 0.44
USP1O94782 AL390719.2-201ENST00000606993 987 ntBASIC17.81■□□□□ 0.44
USP1O94782 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.81■□□□□ 0.44
USP1O94782 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP1O94782 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP1O94782 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.81■□□□□ 0.44
USP1O94782 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP1O94782 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.81■□□□□ 0.44
USP1O94782 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.81■□□□□ 0.44
USP1O94782 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP1O94782 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.81■□□□□ 0.44
USP1O94782 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
USP1O94782 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.81■□□□□ 0.44
USP1O94782 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP1O94782 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms