Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLPXO76031 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLPXO76031 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLPXO76031 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLPXO76031 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.02■□□□□ 0.15
CLPXO76031 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLPXO76031 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CLPXO76031 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
CLPXO76031 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLPXO76031 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.01■□□□□ 0.15
CLPXO76031 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLPXO76031 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLPXO76031 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLPXO76031 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLPXO76031 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.01■□□□□ 0.15
CLPXO76031 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CLPXO76031 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.01■□□□□ 0.15
CLPXO76031 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLPXO76031 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.01■□□□□ 0.15
CLPXO76031 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.01■□□□□ 0.15
CLPXO76031 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.01■□□□□ 0.15
CLPXO76031 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.01■□□□□ 0.15
CLPXO76031 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLPXO76031 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.01■□□□□ 0.15
CLPXO76031 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CLPXO76031 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
CLPXO76031 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLPXO76031 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLPXO76031 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.01■□□□□ 0.15
CLPXO76031 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.01■□□□□ 0.15
CLPXO76031 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.01■□□□□ 0.15
CLPXO76031 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.01■□□□□ 0.15
CLPXO76031 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLPXO76031 AC110285.5-201ENST00000611501 352 ntBASIC16.01■□□□□ 0.15
CLPXO76031 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLPXO76031 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLPXO76031 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLPXO76031 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.01■□□□□ 0.15
CLPXO76031 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
CLPXO76031 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLPXO76031 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.01■□□□□ 0.15
CLPXO76031 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLPXO76031 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLPXO76031 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLPXO76031 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLPXO76031 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.01■□□□□ 0.15
CLPXO76031 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CLPXO76031 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLPXO76031 AC093010.1-201ENST00000473625 1624 ntBASIC16.01■□□□□ 0.15
CLPXO76031 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLPXO76031 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLPXO76031 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLPXO76031 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLPXO76031 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CLPXO76031 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLPXO76031 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16■□□□□ 0.15
CLPXO76031 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLPXO76031 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLPXO76031 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16■□□□□ 0.15
CLPXO76031 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16■□□□□ 0.15
CLPXO76031 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLPXO76031 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16■□□□□ 0.15
CLPXO76031 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLPXO76031 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16■□□□□ 0.15
CLPXO76031 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLPXO76031 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLPXO76031 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLPXO76031 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CLPXO76031 AC233702.5-201ENST00000584107 538 ntBASIC16■□□□□ 0.15
CLPXO76031 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
CLPXO76031 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CLPXO76031 REXO1L12P-201ENST00000622156 912 ntBASIC16■□□□□ 0.15
CLPXO76031 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLPXO76031 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CLPXO76031 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16■□□□□ 0.15
CLPXO76031 AC005915.1-201ENST00000624912 2018 ntBASIC16■□□□□ 0.15
CLPXO76031 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16■□□□□ 0.15
CLPXO76031 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLPXO76031 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLPXO76031 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CLPXO76031 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CLPXO76031 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
CLPXO76031 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
CLPXO76031 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16■□□□□ 0.15
CLPXO76031 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CLPXO76031 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16■□□□□ 0.15
CLPXO76031 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CLPXO76031 AC024909.3-201ENST00000611513 2257 ntBASIC15.99■□□□□ 0.15
CLPXO76031 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLPXO76031 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.99■□□□□ 0.15
CLPXO76031 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLPXO76031 LINC00304-203ENST00000565008 1864 ntBASIC15.99■□□□□ 0.15
CLPXO76031 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.99■□□□□ 0.15
CLPXO76031 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
CLPXO76031 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.99■□□□□ 0.15
CLPXO76031 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC15.99■□□□□ 0.15
CLPXO76031 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC15.99■□□□□ 0.15
CLPXO76031 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.99■□□□□ 0.15
CLPXO76031 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLPXO76031 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms