Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GPC4O75487 TSPY22P-201ENST00000427496 604 ntBASIC17.66■□□□□ 0.42
GPC4O75487 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.66■□□□□ 0.42
GPC4O75487 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GPC4O75487 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.66■□□□□ 0.42
GPC4O75487 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.66■□□□□ 0.42
GPC4O75487 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GPC4O75487 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GPC4O75487 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
GPC4O75487 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GPC4O75487 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GPC4O75487 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GPC4O75487 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.66■□□□□ 0.42
GPC4O75487 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
GPC4O75487 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GPC4O75487 AC006116.8-202ENST00000587620 1550 ntBASIC17.66■□□□□ 0.42
GPC4O75487 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GPC4O75487 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.65■□□□□ 0.42
GPC4O75487 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.65■□□□□ 0.42
GPC4O75487 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GPC4O75487 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
GPC4O75487 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.65■□□□□ 0.42
GPC4O75487 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
GPC4O75487 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GPC4O75487 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
GPC4O75487 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GPC4O75487 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.65■□□□□ 0.42
GPC4O75487 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GPC4O75487 ARMC10P1-201ENST00000313754 855 ntBASIC17.65■□□□□ 0.42
GPC4O75487 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GPC4O75487 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GPC4O75487 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.65■□□□□ 0.42
GPC4O75487 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.65■□□□□ 0.42
GPC4O75487 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.65■□□□□ 0.42
GPC4O75487 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.65■□□□□ 0.42
GPC4O75487 KRT8P26-201ENST00000534154 1276 ntBASIC17.65■□□□□ 0.42
GPC4O75487 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.65■□□□□ 0.42
GPC4O75487 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.65■□□□□ 0.42
GPC4O75487 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.65■□□□□ 0.42
GPC4O75487 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GPC4O75487 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
GPC4O75487 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GPC4O75487 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
GPC4O75487 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
GPC4O75487 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GPC4O75487 KRT18P55-202ENST00000578578 1546 ntBASIC17.65■□□□□ 0.42
GPC4O75487 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GPC4O75487 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GPC4O75487 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.65■□□□□ 0.42
GPC4O75487 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
GPC4O75487 AC022898.2-201ENST00000616822 1312 ntBASIC17.65■□□□□ 0.42
GPC4O75487 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GPC4O75487 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GPC4O75487 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GPC4O75487 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
GPC4O75487 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.65■□□□□ 0.42
GPC4O75487 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GPC4O75487 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
GPC4O75487 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
GPC4O75487 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.64■□□□□ 0.41
GPC4O75487 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GPC4O75487 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GPC4O75487 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.64■□□□□ 0.41
GPC4O75487 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GPC4O75487 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.64■□□□□ 0.41
GPC4O75487 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.64■□□□□ 0.41
GPC4O75487 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
GPC4O75487 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
GPC4O75487 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GPC4O75487 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GPC4O75487 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.64■□□□□ 0.41
GPC4O75487 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
GPC4O75487 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.64■□□□□ 0.41
GPC4O75487 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.64■□□□□ 0.41
GPC4O75487 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
GPC4O75487 AC068472.1-201ENST00000474589 881 ntBASIC17.64■□□□□ 0.41
GPC4O75487 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.64■□□□□ 0.41
GPC4O75487 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.64■□□□□ 0.41
GPC4O75487 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
GPC4O75487 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.64■□□□□ 0.41
GPC4O75487 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
GPC4O75487 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
GPC4O75487 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.64■□□□□ 0.41
GPC4O75487 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.64■□□□□ 0.41
GPC4O75487 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
GPC4O75487 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GPC4O75487 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GPC4O75487 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
GPC4O75487 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.64■□□□□ 0.41
GPC4O75487 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
GPC4O75487 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
GPC4O75487 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
GPC4O75487 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
GPC4O75487 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GPC4O75487 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.64■□□□□ 0.41
GPC4O75487 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GPC4O75487 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GPC4O75487 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GPC4O75487 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
GPC4O75487 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms