Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRCH4O75427 AC016396.2-201ENST00000562575 1417 ntBASIC18.3■□□□□ 0.52
LRCH4O75427 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRCH4O75427 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRCH4O75427 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.3■□□□□ 0.52
LRCH4O75427 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.3■□□□□ 0.52
LRCH4O75427 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRCH4O75427 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRCH4O75427 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LRCH4O75427 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
LRCH4O75427 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.29■□□□□ 0.52
LRCH4O75427 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.29■□□□□ 0.52
LRCH4O75427 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRCH4O75427 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LRCH4O75427 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRCH4O75427 TP73-AS1-210ENST00000637775 1455 ntBASIC18.29■□□□□ 0.52
LRCH4O75427 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LRCH4O75427 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.29■□□□□ 0.52
LRCH4O75427 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRCH4O75427 MYCLP1-201ENST00000372451 1075 ntBASIC18.29■□□□□ 0.52
LRCH4O75427 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LRCH4O75427 IGHV3-47-201ENST00000425060 335 ntBASIC18.29■□□□□ 0.52
LRCH4O75427 AC103564.2-201ENST00000432853 1299 ntBASIC18.29■□□□□ 0.52
LRCH4O75427 IGHV3-52-201ENST00000519770 353 ntBASIC18.29■□□□□ 0.52
LRCH4O75427 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
LRCH4O75427 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.29■□□□□ 0.52
LRCH4O75427 BNIP3P18-201ENST00000593976 575 ntBASIC18.29■□□□□ 0.52
LRCH4O75427 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LRCH4O75427 AC091076.1-201ENST00000610741 619 ntBASIC18.29■□□□□ 0.52
LRCH4O75427 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
LRCH4O75427 KRT8P10-201ENST00000450021 1447 ntBASIC18.29■□□□□ 0.52
LRCH4O75427 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRCH4O75427 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRCH4O75427 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LRCH4O75427 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRCH4O75427 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.29■□□□□ 0.52
LRCH4O75427 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRCH4O75427 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRCH4O75427 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRCH4O75427 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LRCH4O75427 NSUN5P1-202ENST00000421140 1535 ntBASIC18.28■□□□□ 0.52
LRCH4O75427 NSUN5P2-203ENST00000457352 1529 ntBASIC18.28■□□□□ 0.52
LRCH4O75427 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRCH4O75427 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.28■□□□□ 0.52
LRCH4O75427 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRCH4O75427 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRCH4O75427 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRCH4O75427 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRCH4O75427 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRCH4O75427 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRCH4O75427 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRCH4O75427 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.28■□□□□ 0.52
LRCH4O75427 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRCH4O75427 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
LRCH4O75427 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.28■□□□□ 0.52
LRCH4O75427 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.28■□□□□ 0.52
LRCH4O75427 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.28■□□□□ 0.52
LRCH4O75427 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.28■□□□□ 0.52
LRCH4O75427 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.28■□□□□ 0.52
LRCH4O75427 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.28■□□□□ 0.52
LRCH4O75427 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
LRCH4O75427 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
LRCH4O75427 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRCH4O75427 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRCH4O75427 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.28■□□□□ 0.52
LRCH4O75427 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRCH4O75427 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRCH4O75427 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.28■□□□□ 0.52
LRCH4O75427 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRCH4O75427 AC116353.5-201ENST00000638148 1699 ntBASIC18.28■□□□□ 0.52
LRCH4O75427 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRCH4O75427 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
LRCH4O75427 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LRCH4O75427 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRCH4O75427 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LRCH4O75427 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRCH4O75427 AL353593.2-201ENST00000602529 1483 ntBASIC18.27■□□□□ 0.52
LRCH4O75427 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
LRCH4O75427 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LRCH4O75427 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LRCH4O75427 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
LRCH4O75427 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRCH4O75427 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRCH4O75427 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRCH4O75427 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LRCH4O75427 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
LRCH4O75427 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LRCH4O75427 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRCH4O75427 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
LRCH4O75427 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LRCH4O75427 ATP5G2P1-201ENST00000433580 426 ntBASIC18.27■□□□□ 0.52
LRCH4O75427 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.27■□□□□ 0.52
LRCH4O75427 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
LRCH4O75427 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LRCH4O75427 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.51
LRCH4O75427 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.27■□□□□ 0.51
LRCH4O75427 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LRCH4O75427 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
LRCH4O75427 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
LRCH4O75427 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms