Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEF11O60813 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEF11O60813 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEF11O60813 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.82■□□□□ 0.44
PRAMEF11O60813 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEF11O60813 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEF11O60813 AL020989.1-201ENST00000422979 469 ntBASIC17.82■□□□□ 0.44
PRAMEF11O60813 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.82■□□□□ 0.44
PRAMEF11O60813 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PRAMEF11O60813 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.82■□□□□ 0.44
PRAMEF11O60813 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEF11O60813 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEF11O60813 HCG11-201ENST00000411553 5696 ntBASIC17.82■□□□□ 0.44
PRAMEF11O60813 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
PRAMEF11O60813 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEF11O60813 PCDHB18P-201ENST00000524813 2368 ntBASIC17.82■□□□□ 0.44
PRAMEF11O60813 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEF11O60813 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
PRAMEF11O60813 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEF11O60813 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEF11O60813 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEF11O60813 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEF11O60813 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.82■□□□□ 0.44
PRAMEF11O60813 AC046185.3-201ENST00000623228 1824 ntBASIC17.82■□□□□ 0.44
PRAMEF11O60813 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF11O60813 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF11O60813 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PRAMEF11O60813 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF11O60813 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF11O60813 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF11O60813 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
PRAMEF11O60813 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF11O60813 AL356309.3-201ENST00000624132 1934 ntBASIC17.81■□□□□ 0.44
PRAMEF11O60813 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF11O60813 AC004870.1-201ENST00000315132 882 ntBASIC17.81■□□□□ 0.44
PRAMEF11O60813 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.81■□□□□ 0.44
PRAMEF11O60813 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF11O60813 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF11O60813 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.81■□□□□ 0.44
PRAMEF11O60813 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.81■□□□□ 0.44
PRAMEF11O60813 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.81■□□□□ 0.44
PRAMEF11O60813 FAAHP1-202ENST00000446499 1238 ntBASIC17.81■□□□□ 0.44
PRAMEF11O60813 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
PRAMEF11O60813 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.81■□□□□ 0.44
PRAMEF11O60813 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.81■□□□□ 0.44
PRAMEF11O60813 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF11O60813 AL139288.1-201ENST00000623748 933 ntBASIC17.81■□□□□ 0.44
PRAMEF11O60813 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF11O60813 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF11O60813 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF11O60813 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF11O60813 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.81■□□□□ 0.44
PRAMEF11O60813 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF11O60813 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
PRAMEF11O60813 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.81■□□□□ 0.44
PRAMEF11O60813 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PRAMEF11O60813 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF11O60813 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF11O60813 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF11O60813 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF11O60813 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF11O60813 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF11O60813 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.81■□□□□ 0.44
PRAMEF11O60813 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.8■□□□□ 0.44
PRAMEF11O60813 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.8■□□□□ 0.44
PRAMEF11O60813 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEF11O60813 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEF11O60813 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEF11O60813 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEF11O60813 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PRAMEF11O60813 AC148477.5-201ENST00000625164 1645 ntBASIC17.8■□□□□ 0.44
PRAMEF11O60813 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEF11O60813 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEF11O60813 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEF11O60813 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
PRAMEF11O60813 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.8■□□□□ 0.44
PRAMEF11O60813 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PRAMEF11O60813 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEF11O60813 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.8■□□□□ 0.44
PRAMEF11O60813 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.8■□□□□ 0.44
PRAMEF11O60813 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.8■□□□□ 0.44
PRAMEF11O60813 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.8■□□□□ 0.44
PRAMEF11O60813 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEF11O60813 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.8■□□□□ 0.44
PRAMEF11O60813 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.8■□□□□ 0.44
PRAMEF11O60813 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEF11O60813 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.8■□□□□ 0.44
PRAMEF11O60813 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.8■□□□□ 0.44
PRAMEF11O60813 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEF11O60813 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.8■□□□□ 0.44
PRAMEF11O60813 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEF11O60813 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEF11O60813 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEF11O60813 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.8■□□□□ 0.44
PRAMEF11O60813 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEF11O60813 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
PRAMEF11O60813 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PRAMEF11O60813 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEF11O60813 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
PRAMEF11O60813 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms