Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.81■□□□□ 0.28
LCMT2O60294 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
LCMT2O60294 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LCMT2O60294 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LCMT2O60294 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LCMT2O60294 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
LCMT2O60294 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
LCMT2O60294 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LCMT2O60294 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
LCMT2O60294 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.81■□□□□ 0.28
LCMT2O60294 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.81■□□□□ 0.28
LCMT2O60294 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LCMT2O60294 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LCMT2O60294 LYSMD4-203ENST00000378904 2122 ntBASIC16.81■□□□□ 0.28
LCMT2O60294 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
LCMT2O60294 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
LCMT2O60294 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
LCMT2O60294 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LCMT2O60294 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LCMT2O60294 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.81■□□□□ 0.28
LCMT2O60294 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LCMT2O60294 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LCMT2O60294 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
LCMT2O60294 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
LCMT2O60294 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LCMT2O60294 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
LCMT2O60294 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LCMT2O60294 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.81■□□□□ 0.28
LCMT2O60294 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.81■□□□□ 0.28
LCMT2O60294 ABCD1P5-201ENST00000445663 754 ntBASIC16.81■□□□□ 0.28
LCMT2O60294 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.81■□□□□ 0.28
LCMT2O60294 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.81■□□□□ 0.28
LCMT2O60294 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.81■□□□□ 0.28
LCMT2O60294 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
LCMT2O60294 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.81■□□□□ 0.28
LCMT2O60294 AP000867.4-201ENST00000641616 219 ntBASIC16.81■□□□□ 0.28
LCMT2O60294 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LCMT2O60294 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.81■□□□□ 0.28
LCMT2O60294 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LCMT2O60294 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.81■□□□□ 0.28
LCMT2O60294 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
LCMT2O60294 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LCMT2O60294 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LCMT2O60294 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LCMT2O60294 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.81■□□□□ 0.28
LCMT2O60294 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LCMT2O60294 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.81■□□□□ 0.28
LCMT2O60294 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.81■□□□□ 0.28
LCMT2O60294 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LCMT2O60294 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
LCMT2O60294 PMPCAP1-201ENST00000508114 1576 ntBASIC16.81■□□□□ 0.28
LCMT2O60294 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LCMT2O60294 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.81■□□□□ 0.28
LCMT2O60294 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LCMT2O60294 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LCMT2O60294 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LCMT2O60294 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.8■□□□□ 0.28
LCMT2O60294 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.8■□□□□ 0.28
LCMT2O60294 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.8■□□□□ 0.28
LCMT2O60294 AC132938.5-201ENST00000624980 1813 ntBASIC16.8■□□□□ 0.28
LCMT2O60294 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.8■□□□□ 0.28
LCMT2O60294 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LCMT2O60294 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LCMT2O60294 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LCMT2O60294 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LCMT2O60294 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LCMT2O60294 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LCMT2O60294 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.8■□□□□ 0.28
LCMT2O60294 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LCMT2O60294 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LCMT2O60294 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LCMT2O60294 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.8■□□□□ 0.28
LCMT2O60294 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.8■□□□□ 0.28
LCMT2O60294 IGHV3-52-201ENST00000519770 353 ntBASIC16.8■□□□□ 0.28
LCMT2O60294 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
LCMT2O60294 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.8■□□□□ 0.28
LCMT2O60294 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LCMT2O60294 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
LCMT2O60294 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LCMT2O60294 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LCMT2O60294 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
LCMT2O60294 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
LCMT2O60294 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
LCMT2O60294 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
LCMT2O60294 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.8■□□□□ 0.28
LCMT2O60294 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LCMT2O60294 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LCMT2O60294 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LCMT2O60294 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.8■□□□□ 0.28
LCMT2O60294 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.8■□□□□ 0.28
LCMT2O60294 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LCMT2O60294 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
LCMT2O60294 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LCMT2O60294 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LCMT2O60294 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LCMT2O60294 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LCMT2O60294 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LCMT2O60294 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LCMT2O60294 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LCMT2O60294 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms