Protein–RNA interactions for Protein: O15260

SURF4, Surfeit locus protein 4, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SURF4O15260 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SURF4O15260 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC15.9■□□□□ 0.14
SURF4O15260 P4HB-223ENST00000576390 439 ntTSL 4 BASIC15.9■□□□□ 0.14
SURF4O15260 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SURF4O15260 AC009154.2-201ENST00000621177 724 ntBASIC15.9■□□□□ 0.14
SURF4O15260 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.9■□□□□ 0.14
SURF4O15260 LINC01311-201ENST00000565162 1445 ntBASIC15.9■□□□□ 0.14
SURF4O15260 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SURF4O15260 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SURF4O15260 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SURF4O15260 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.9■□□□□ 0.14
SURF4O15260 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
SURF4O15260 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SURF4O15260 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SURF4O15260 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SURF4O15260 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SURF4O15260 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SURF4O15260 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SURF4O15260 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SURF4O15260 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SURF4O15260 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.9■□□□□ 0.14
SURF4O15260 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SURF4O15260 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SURF4O15260 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SURF4O15260 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SURF4O15260 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SURF4O15260 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SURF4O15260 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.89■□□□□ 0.13
SURF4O15260 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SURF4O15260 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
SURF4O15260 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SURF4O15260 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SURF4O15260 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
SURF4O15260 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
SURF4O15260 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SURF4O15260 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.89■□□□□ 0.13
SURF4O15260 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
SURF4O15260 TERF1P1-201ENST00000311003 1181 ntBASIC15.89■□□□□ 0.13
SURF4O15260 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SURF4O15260 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SURF4O15260 AC005521.1-201ENST00000393351 872 ntBASIC15.89■□□□□ 0.13
SURF4O15260 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC15.89■□□□□ 0.13
SURF4O15260 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SURF4O15260 AC034232.1-201ENST00000506026 1064 ntBASIC15.89■□□□□ 0.13
SURF4O15260 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC15.89■□□□□ 0.13
SURF4O15260 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC15.89■□□□□ 0.13
SURF4O15260 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC15.89■□□□□ 0.13
SURF4O15260 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.89■□□□□ 0.13
SURF4O15260 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SURF4O15260 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.89■□□□□ 0.13
SURF4O15260 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SURF4O15260 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
SURF4O15260 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SURF4O15260 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SURF4O15260 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SURF4O15260 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC15.89■□□□□ 0.13
SURF4O15260 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
SURF4O15260 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SURF4O15260 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
SURF4O15260 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SURF4O15260 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.89■□□□□ 0.13
SURF4O15260 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SURF4O15260 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SURF4O15260 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SURF4O15260 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SURF4O15260 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
SURF4O15260 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SURF4O15260 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SURF4O15260 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
SURF4O15260 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
SURF4O15260 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.88■□□□□ 0.13
SURF4O15260 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SURF4O15260 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SURF4O15260 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
SURF4O15260 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SURF4O15260 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.88■□□□□ 0.13
SURF4O15260 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC15.88■□□□□ 0.13
SURF4O15260 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC15.88■□□□□ 0.13
SURF4O15260 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.88■□□□□ 0.13
SURF4O15260 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15.88■□□□□ 0.13
SURF4O15260 AC112698.1-201ENST00000510299 916 ntBASIC15.88■□□□□ 0.13
SURF4O15260 CD81-212ENST00000526072 1172 ntTSL 5 BASIC15.88■□□□□ 0.13
SURF4O15260 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.88■□□□□ 0.13
SURF4O15260 GCSHP2-201ENST00000560971 527 ntBASIC15.88■□□□□ 0.13
SURF4O15260 AC140113.3-201ENST00000605663 199 ntBASIC15.88■□□□□ 0.13
SURF4O15260 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC15.88■□□□□ 0.13
SURF4O15260 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SURF4O15260 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SURF4O15260 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SURF4O15260 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SURF4O15260 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SURF4O15260 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
SURF4O15260 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SURF4O15260 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SURF4O15260 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SURF4O15260 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SURF4O15260 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SURF4O15260 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SURF4O15260 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SURF4O15260 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms