Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TRIM38O00635 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM38O00635 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TRIM38O00635 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM38O00635 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.72■□□□□ 0.43
TRIM38O00635 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.72■□□□□ 0.43
TRIM38O00635 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM38O00635 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
TRIM38O00635 FLJ13224-201ENST00000313737 1514 ntBASIC17.72■□□□□ 0.43
TRIM38O00635 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM38O00635 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM38O00635 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM38O00635 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM38O00635 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.71■□□□□ 0.43
TRIM38O00635 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM38O00635 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.71■□□□□ 0.43
TRIM38O00635 AC009102.3-201ENST00000623118 1491 ntBASIC17.71■□□□□ 0.43
TRIM38O00635 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.71■□□□□ 0.43
TRIM38O00635 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
TRIM38O00635 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.71■□□□□ 0.43
TRIM38O00635 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM38O00635 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM38O00635 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM38O00635 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.71■□□□□ 0.43
TRIM38O00635 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.71■□□□□ 0.43
TRIM38O00635 RCN1P2-201ENST00000398357 915 ntBASIC17.71■□□□□ 0.43
TRIM38O00635 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TRIM38O00635 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM38O00635 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TRIM38O00635 KRT18P67-201ENST00000432816 1264 ntBASIC17.71■□□□□ 0.43
TRIM38O00635 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.71■□□□□ 0.43
TRIM38O00635 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM38O00635 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TRIM38O00635 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.71■□□□□ 0.43
TRIM38O00635 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM38O00635 SLC25A1P1-201ENST00000528351 927 ntBASIC17.71■□□□□ 0.43
TRIM38O00635 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.71■□□□□ 0.43
TRIM38O00635 AC005336.2-201ENST00000593183 939 ntBASIC17.71■□□□□ 0.43
TRIM38O00635 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.71■□□□□ 0.43
TRIM38O00635 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.71■□□□□ 0.43
TRIM38O00635 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.71■□□□□ 0.43
TRIM38O00635 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM38O00635 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM38O00635 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.71■□□□□ 0.43
TRIM38O00635 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM38O00635 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM38O00635 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.71■□□□□ 0.43
TRIM38O00635 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM38O00635 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.71■□□□□ 0.43
TRIM38O00635 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM38O00635 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.71■□□□□ 0.43
TRIM38O00635 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
TRIM38O00635 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
TRIM38O00635 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.71■□□□□ 0.42
TRIM38O00635 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.71■□□□□ 0.42
TRIM38O00635 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM38O00635 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
TRIM38O00635 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
TRIM38O00635 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM38O00635 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM38O00635 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.7■□□□□ 0.42
TRIM38O00635 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM38O00635 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.7■□□□□ 0.42
TRIM38O00635 MIR574-201ENST00000385209 96 ntBASIC17.7■□□□□ 0.42
TRIM38O00635 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
TRIM38O00635 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.7■□□□□ 0.42
TRIM38O00635 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM38O00635 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.7■□□□□ 0.42
TRIM38O00635 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TRIM38O00635 AC008608.2-201ENST00000606089 416 ntBASIC17.7■□□□□ 0.42
TRIM38O00635 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM38O00635 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
TRIM38O00635 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM38O00635 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM38O00635 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM38O00635 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM38O00635 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM38O00635 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM38O00635 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
TRIM38O00635 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM38O00635 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM38O00635 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.69■□□□□ 0.42
TRIM38O00635 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.69■□□□□ 0.42
TRIM38O00635 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM38O00635 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM38O00635 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM38O00635 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.69■□□□□ 0.42
TRIM38O00635 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM38O00635 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM38O00635 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM38O00635 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM38O00635 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.69■□□□□ 0.42
TRIM38O00635 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TRIM38O00635 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM38O00635 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TRIM38O00635 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM38O00635 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM38O00635 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM38O00635 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
TRIM38O00635 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms