Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UPK1AO00322 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UPK1AO00322 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
UPK1AO00322 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
UPK1AO00322 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.68■□□□□ 0.26
UPK1AO00322 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.68■□□□□ 0.26
UPK1AO00322 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
UPK1AO00322 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UPK1AO00322 HLA-J-201ENST00000462773 1622 ntBASIC16.68■□□□□ 0.26
UPK1AO00322 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UPK1AO00322 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
UPK1AO00322 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.68■□□□□ 0.26
UPK1AO00322 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UPK1AO00322 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
UPK1AO00322 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.68■□□□□ 0.26
UPK1AO00322 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
UPK1AO00322 AC011498.5-201ENST00000592027 486 ntBASIC16.68■□□□□ 0.26
UPK1AO00322 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.68■□□□□ 0.26
UPK1AO00322 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
UPK1AO00322 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.68■□□□□ 0.26
UPK1AO00322 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
UPK1AO00322 AL121956.5-201ENST00000625261 221 ntBASIC16.68■□□□□ 0.26
UPK1AO00322 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.68■□□□□ 0.26
UPK1AO00322 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UPK1AO00322 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
UPK1AO00322 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.68■□□□□ 0.26
UPK1AO00322 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UPK1AO00322 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UPK1AO00322 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
UPK1AO00322 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
UPK1AO00322 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
UPK1AO00322 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.67■□□□□ 0.26
UPK1AO00322 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPK1AO00322 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPK1AO00322 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPK1AO00322 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPK1AO00322 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
UPK1AO00322 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPK1AO00322 HCG11-201ENST00000411553 5696 ntBASIC16.67■□□□□ 0.26
UPK1AO00322 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
UPK1AO00322 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPK1AO00322 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPK1AO00322 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPK1AO00322 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
UPK1AO00322 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPK1AO00322 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
UPK1AO00322 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.67■□□□□ 0.26
UPK1AO00322 TSPY22P-201ENST00000427496 604 ntBASIC16.67■□□□□ 0.26
UPK1AO00322 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
UPK1AO00322 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPK1AO00322 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.67■□□□□ 0.26
UPK1AO00322 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.67■□□□□ 0.26
UPK1AO00322 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
UPK1AO00322 AL590326.2-201ENST00000625139 305 ntBASIC16.67■□□□□ 0.26
UPK1AO00322 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPK1AO00322 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPK1AO00322 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPK1AO00322 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPK1AO00322 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
UPK1AO00322 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPK1AO00322 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
UPK1AO00322 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.67■□□□□ 0.26
UPK1AO00322 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
UPK1AO00322 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.67■□□□□ 0.26
UPK1AO00322 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
UPK1AO00322 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
UPK1AO00322 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
UPK1AO00322 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPK1AO00322 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPK1AO00322 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
UPK1AO00322 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPK1AO00322 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
UPK1AO00322 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UPK1AO00322 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
UPK1AO00322 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UPK1AO00322 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UPK1AO00322 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UPK1AO00322 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
UPK1AO00322 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UPK1AO00322 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.66■□□□□ 0.26
UPK1AO00322 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.66■□□□□ 0.26
UPK1AO00322 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.66■□□□□ 0.26
UPK1AO00322 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.66■□□□□ 0.26
UPK1AO00322 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UPK1AO00322 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UPK1AO00322 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UPK1AO00322 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UPK1AO00322 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
UPK1AO00322 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
UPK1AO00322 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.66■□□□□ 0.26
UPK1AO00322 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UPK1AO00322 PCDH8P1-201ENST00000428983 2773 ntBASIC16.66■□□□□ 0.26
UPK1AO00322 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.66■□□□□ 0.26
UPK1AO00322 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
UPK1AO00322 FAM86EP-206ENST00000510506 987 ntBASIC16.66■□□□□ 0.26
UPK1AO00322 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.66■□□□□ 0.26
UPK1AO00322 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.66■□□□□ 0.26
UPK1AO00322 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
UPK1AO00322 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.66■□□□□ 0.26
UPK1AO00322 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms