Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TAF4O00268 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.25■□□□□ 0.35
TAF4O00268 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TAF4O00268 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TAF4O00268 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TAF4O00268 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.25■□□□□ 0.35
TAF4O00268 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TAF4O00268 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.25■□□□□ 0.35
TAF4O00268 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.25■□□□□ 0.35
TAF4O00268 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TAF4O00268 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TAF4O00268 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.25■□□□□ 0.35
TAF4O00268 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.25■□□□□ 0.35
TAF4O00268 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.25■□□□□ 0.35
TAF4O00268 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.25■□□□□ 0.35
TAF4O00268 SPCS2P1-201ENST00000561636 679 ntBASIC17.25■□□□□ 0.35
TAF4O00268 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.25■□□□□ 0.35
TAF4O00268 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.25■□□□□ 0.35
TAF4O00268 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.25■□□□□ 0.35
TAF4O00268 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.25■□□□□ 0.35
TAF4O00268 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.25■□□□□ 0.35
TAF4O00268 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TAF4O00268 TNRC18P3-201ENST00000441896 2691 ntBASIC17.25■□□□□ 0.35
TAF4O00268 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TAF4O00268 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TAF4O00268 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.25■□□□□ 0.35
TAF4O00268 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.25■□□□□ 0.35
TAF4O00268 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TAF4O00268 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TAF4O00268 FER1L4-210ENST00000615531 5998 ntBASIC17.24■□□□□ 0.35
TAF4O00268 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.24■□□□□ 0.35
TAF4O00268 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TAF4O00268 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TAF4O00268 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.24■□□□□ 0.35
TAF4O00268 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TAF4O00268 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
TAF4O00268 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TAF4O00268 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TAF4O00268 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TAF4O00268 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TAF4O00268 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TAF4O00268 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TAF4O00268 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TAF4O00268 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.24■□□□□ 0.35
TAF4O00268 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.24■□□□□ 0.35
TAF4O00268 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TAF4O00268 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TAF4O00268 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.24■□□□□ 0.35
TAF4O00268 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.24■□□□□ 0.35
TAF4O00268 AC106028.4-201ENST00000614509 607 ntBASIC17.24■□□□□ 0.35
TAF4O00268 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TAF4O00268 SDHAP1-207ENST00000440850 2000 ntBASIC17.24■□□□□ 0.35
TAF4O00268 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.24■□□□□ 0.35
TAF4O00268 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.24■□□□□ 0.35
TAF4O00268 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TAF4O00268 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TAF4O00268 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TAF4O00268 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TAF4O00268 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TAF4O00268 KRT89P-201ENST00000620027 1478 ntBASIC17.24■□□□□ 0.35
TAF4O00268 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.24■□□□□ 0.35
TAF4O00268 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TAF4O00268 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TAF4O00268 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.24■□□□□ 0.35
TAF4O00268 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TAF4O00268 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.23■□□□□ 0.35
TAF4O00268 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TAF4O00268 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TAF4O00268 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TAF4O00268 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TAF4O00268 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TAF4O00268 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TAF4O00268 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TAF4O00268 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TAF4O00268 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TAF4O00268 AP005117.1-201ENST00000584346 1413 ntBASIC17.23■□□□□ 0.35
TAF4O00268 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TAF4O00268 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TAF4O00268 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TAF4O00268 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TAF4O00268 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TAF4O00268 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.23■□□□□ 0.35
TAF4O00268 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.23■□□□□ 0.35
TAF4O00268 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.23■□□□□ 0.35
TAF4O00268 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.23■□□□□ 0.35
TAF4O00268 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.23■□□□□ 0.35
TAF4O00268 AC005829.1-201ENST00000570002 483 ntBASIC17.23■□□□□ 0.35
TAF4O00268 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.23■□□□□ 0.35
TAF4O00268 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TAF4O00268 AC008735.5-201ENST00000623544 497 ntBASIC17.23■□□□□ 0.35
TAF4O00268 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.23■□□□□ 0.35
TAF4O00268 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TAF4O00268 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.23■□□□□ 0.35
TAF4O00268 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.23■□□□□ 0.35
TAF4O00268 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TAF4O00268 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TAF4O00268 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TAF4O00268 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.23■□□□□ 0.35
TAF4O00268 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TAF4O00268 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms