Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.55■□□□□ 0.08
NPIPB4C9JG80 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPB4C9JG80 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPB4C9JG80 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPB4C9JG80 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPB4C9JG80 NSUN5P1-202ENST00000421140 1535 ntBASIC15.55■□□□□ 0.08
NPIPB4C9JG80 NSUN5P2-203ENST00000457352 1529 ntBASIC15.55■□□□□ 0.08
NPIPB4C9JG80 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPB4C9JG80 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
NPIPB4C9JG80 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPB4C9JG80 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.55■□□□□ 0.08
NPIPB4C9JG80 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPB4C9JG80 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.55■□□□□ 0.08
NPIPB4C9JG80 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.55■□□□□ 0.08
NPIPB4C9JG80 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPB4C9JG80 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPB4C9JG80 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.55■□□□□ 0.08
NPIPB4C9JG80 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.55■□□□□ 0.08
NPIPB4C9JG80 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.55■□□□□ 0.08
NPIPB4C9JG80 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.55■□□□□ 0.08
NPIPB4C9JG80 AC012615.1-201ENST00000565797 1299 ntBASIC15.55■□□□□ 0.08
NPIPB4C9JG80 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
NPIPB4C9JG80 MIR3180-1-201ENST00000580374 94 ntBASIC15.55■□□□□ 0.08
NPIPB4C9JG80 MIR3180-3-201ENST00000584616 94 ntBASIC15.55■□□□□ 0.08
NPIPB4C9JG80 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15.55■□□□□ 0.08
NPIPB4C9JG80 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.55■□□□□ 0.08
NPIPB4C9JG80 AC114341.1-201ENST00000618070 349 ntBASIC15.55■□□□□ 0.08
NPIPB4C9JG80 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPB4C9JG80 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.55■□□□□ 0.08
NPIPB4C9JG80 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPB4C9JG80 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPB4C9JG80 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPB4C9JG80 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPB4C9JG80 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.55■□□□□ 0.08
NPIPB4C9JG80 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.55■□□□□ 0.08
NPIPB4C9JG80 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPB4C9JG80 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPB4C9JG80 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPB4C9JG80 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPB4C9JG80 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPB4C9JG80 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPB4C9JG80 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.55■□□□□ 0.08
NPIPB4C9JG80 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPB4C9JG80 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.55■□□□□ 0.08
NPIPB4C9JG80 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPB4C9JG80 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPB4C9JG80 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
NPIPB4C9JG80 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPB4C9JG80 LINC02012-201ENST00000608206 1725 ntBASIC15.54■□□□□ 0.08
NPIPB4C9JG80 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPB4C9JG80 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPB4C9JG80 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPB4C9JG80 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPB4C9JG80 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.54■□□□□ 0.08
NPIPB4C9JG80 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
NPIPB4C9JG80 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
NPIPB4C9JG80 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPB4C9JG80 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPB4C9JG80 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPB4C9JG80 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPB4C9JG80 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPB4C9JG80 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC15.54■□□□□ 0.08
NPIPB4C9JG80 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPB4C9JG80 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.54■□□□□ 0.08
NPIPB4C9JG80 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
NPIPB4C9JG80 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.54■□□□□ 0.08
NPIPB4C9JG80 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.54■□□□□ 0.08
NPIPB4C9JG80 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.54■□□□□ 0.08
NPIPB4C9JG80 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.54■□□□□ 0.08
NPIPB4C9JG80 MINOS1P3-201ENST00000457048 203 ntBASIC15.54■□□□□ 0.08
NPIPB4C9JG80 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPB4C9JG80 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.54■□□□□ 0.08
NPIPB4C9JG80 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPB4C9JG80 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
NPIPB4C9JG80 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC15.54■□□□□ 0.08
NPIPB4C9JG80 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPB4C9JG80 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
NPIPB4C9JG80 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.54■□□□□ 0.08
NPIPB4C9JG80 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPB4C9JG80 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.54■□□□□ 0.08
NPIPB4C9JG80 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
NPIPB4C9JG80 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.54■□□□□ 0.08
NPIPB4C9JG80 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPB4C9JG80 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
NPIPB4C9JG80 AC093525.9-201ENST00000624961 1746 ntBASIC15.54■□□□□ 0.08
NPIPB4C9JG80 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
NPIPB4C9JG80 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPB4C9JG80 HR-201ENST00000312841 5351 ntTSL 5 BASIC15.53■□□□□ 0.08
NPIPB4C9JG80 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.53■□□□□ 0.08
NPIPB4C9JG80 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPB4C9JG80 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPB4C9JG80 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPB4C9JG80 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPB4C9JG80 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPB4C9JG80 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPB4C9JG80 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.53■□□□□ 0.08
NPIPB4C9JG80 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.53■□□□□ 0.08
NPIPB4C9JG80 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPB4C9JG80 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPB4C9JG80 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms