Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
C4orf47A7E2U8 COX5BP2-201ENST00000392354 334 ntBASIC17.14■□□□□ 0.33
C4orf47A7E2U8 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.14■□□□□ 0.33
C4orf47A7E2U8 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.14■□□□□ 0.33
C4orf47A7E2U8 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
C4orf47A7E2U8 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
C4orf47A7E2U8 AC023141.5-201ENST00000458585 616 ntBASIC17.14■□□□□ 0.33
C4orf47A7E2U8 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.14■□□□□ 0.33
C4orf47A7E2U8 AC093520.2-201ENST00000561830 333 ntBASIC17.14■□□□□ 0.33
C4orf47A7E2U8 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
C4orf47A7E2U8 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
C4orf47A7E2U8 AJ011932.1-201ENST00000621707 465 ntBASIC17.14■□□□□ 0.33
C4orf47A7E2U8 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
C4orf47A7E2U8 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
C4orf47A7E2U8 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
C4orf47A7E2U8 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
C4orf47A7E2U8 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.14■□□□□ 0.33
C4orf47A7E2U8 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
C4orf47A7E2U8 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
C4orf47A7E2U8 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
C4orf47A7E2U8 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
C4orf47A7E2U8 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.13■□□□□ 0.33
C4orf47A7E2U8 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
C4orf47A7E2U8 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
C4orf47A7E2U8 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.13■□□□□ 0.33
C4orf47A7E2U8 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.13■□□□□ 0.33
C4orf47A7E2U8 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.13■□□□□ 0.33
C4orf47A7E2U8 AC005082.1-201ENST00000413042 2259 ntBASIC17.13■□□□□ 0.33
C4orf47A7E2U8 AL353593.2-201ENST00000602529 1483 ntBASIC17.13■□□□□ 0.33
C4orf47A7E2U8 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.13■□□□□ 0.33
C4orf47A7E2U8 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.13■□□□□ 0.33
C4orf47A7E2U8 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.13■□□□□ 0.33
C4orf47A7E2U8 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.13■□□□□ 0.33
C4orf47A7E2U8 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
C4orf47A7E2U8 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
C4orf47A7E2U8 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
C4orf47A7E2U8 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
C4orf47A7E2U8 PMS2P4-201ENST00000412466 1052 ntBASIC17.13■□□□□ 0.33
C4orf47A7E2U8 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
C4orf47A7E2U8 AC093214.1-201ENST00000511688 1107 ntBASIC17.13■□□□□ 0.33
C4orf47A7E2U8 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
C4orf47A7E2U8 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.13■□□□□ 0.33
C4orf47A7E2U8 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
C4orf47A7E2U8 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.13■□□□□ 0.33
C4orf47A7E2U8 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.13■□□□□ 0.33
C4orf47A7E2U8 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.13■□□□□ 0.33
C4orf47A7E2U8 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.13■□□□□ 0.33
C4orf47A7E2U8 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
C4orf47A7E2U8 Z92544.3-201ENST00000624747 417 ntBASIC17.13■□□□□ 0.33
C4orf47A7E2U8 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
C4orf47A7E2U8 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
C4orf47A7E2U8 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
C4orf47A7E2U8 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
C4orf47A7E2U8 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.13■□□□□ 0.33
C4orf47A7E2U8 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
C4orf47A7E2U8 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
C4orf47A7E2U8 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
C4orf47A7E2U8 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.13■□□□□ 0.33
C4orf47A7E2U8 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
C4orf47A7E2U8 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
C4orf47A7E2U8 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
C4orf47A7E2U8 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
C4orf47A7E2U8 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
C4orf47A7E2U8 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
C4orf47A7E2U8 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
C4orf47A7E2U8 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.12■□□□□ 0.33
C4orf47A7E2U8 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C4orf47A7E2U8 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C4orf47A7E2U8 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
C4orf47A7E2U8 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C4orf47A7E2U8 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C4orf47A7E2U8 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
C4orf47A7E2U8 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
C4orf47A7E2U8 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C4orf47A7E2U8 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
C4orf47A7E2U8 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C4orf47A7E2U8 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.12■□□□□ 0.33
C4orf47A7E2U8 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
C4orf47A7E2U8 GK-202ENST00000378941 458 ntTSL 3 BASIC17.12■□□□□ 0.33
C4orf47A7E2U8 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
C4orf47A7E2U8 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.12■□□□□ 0.33
C4orf47A7E2U8 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.12■□□□□ 0.33
C4orf47A7E2U8 PTCHD3P3-201ENST00000403073 906 ntBASIC17.12■□□□□ 0.33
C4orf47A7E2U8 KLF4P1-201ENST00000412782 1185 ntBASIC17.12■□□□□ 0.33
C4orf47A7E2U8 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.12■□□□□ 0.33
C4orf47A7E2U8 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
C4orf47A7E2U8 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C4orf47A7E2U8 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.12■□□□□ 0.33
C4orf47A7E2U8 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.12■□□□□ 0.33
C4orf47A7E2U8 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.12■□□□□ 0.33
C4orf47A7E2U8 OR7E47P-204ENST00000575924 449 ntBASIC17.12■□□□□ 0.33
C4orf47A7E2U8 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.12■□□□□ 0.33
C4orf47A7E2U8 AC022145.2-201ENST00000598203 171 ntBASIC17.12■□□□□ 0.33
C4orf47A7E2U8 REXO1L3P-201ENST00000622202 1288 ntBASIC17.12■□□□□ 0.33
C4orf47A7E2U8 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.12■□□□□ 0.33
C4orf47A7E2U8 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C4orf47A7E2U8 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
C4orf47A7E2U8 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C4orf47A7E2U8 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.12■□□□□ 0.33
C4orf47A7E2U8 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms