Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CAPN8A6NHC0 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CAPN8A6NHC0 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.88■□□□□ 0.45
CAPN8A6NHC0 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CAPN8A6NHC0 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CAPN8A6NHC0 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CAPN8A6NHC0 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CAPN8A6NHC0 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CAPN8A6NHC0 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
CAPN8A6NHC0 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CAPN8A6NHC0 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CAPN8A6NHC0 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CAPN8A6NHC0 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.87■□□□□ 0.45
CAPN8A6NHC0 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CAPN8A6NHC0 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CAPN8A6NHC0 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.87■□□□□ 0.45
CAPN8A6NHC0 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.87■□□□□ 0.45
CAPN8A6NHC0 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CAPN8A6NHC0 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.87■□□□□ 0.45
CAPN8A6NHC0 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CAPN8A6NHC0 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CAPN8A6NHC0 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
CAPN8A6NHC0 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CAPN8A6NHC0 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
CAPN8A6NHC0 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CAPN8A6NHC0 AC096633.1-201ENST00000422446 749 ntBASIC17.87■□□□□ 0.45
CAPN8A6NHC0 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CAPN8A6NHC0 MINOS1P3-201ENST00000457048 203 ntBASIC17.87■□□□□ 0.45
CAPN8A6NHC0 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CAPN8A6NHC0 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.87■□□□□ 0.45
CAPN8A6NHC0 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.87■□□□□ 0.45
CAPN8A6NHC0 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.87■□□□□ 0.45
CAPN8A6NHC0 AC139530.3-201ENST00000620344 690 ntBASIC17.87■□□□□ 0.45
CAPN8A6NHC0 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.87■□□□□ 0.45
CAPN8A6NHC0 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CAPN8A6NHC0 AC097374.2-201ENST00000618617 1306 ntBASIC17.87■□□□□ 0.45
CAPN8A6NHC0 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CAPN8A6NHC0 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CAPN8A6NHC0 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CAPN8A6NHC0 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.87■□□□□ 0.45
CAPN8A6NHC0 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CAPN8A6NHC0 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CAPN8A6NHC0 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CAPN8A6NHC0 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CAPN8A6NHC0 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.87■□□□□ 0.45
CAPN8A6NHC0 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CAPN8A6NHC0 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.87■□□□□ 0.45
CAPN8A6NHC0 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CAPN8A6NHC0 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CAPN8A6NHC0 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.86■□□□□ 0.45
CAPN8A6NHC0 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CAPN8A6NHC0 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CAPN8A6NHC0 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CAPN8A6NHC0 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CAPN8A6NHC0 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.86■□□□□ 0.45
CAPN8A6NHC0 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CAPN8A6NHC0 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CAPN8A6NHC0 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.86■□□□□ 0.45
CAPN8A6NHC0 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CAPN8A6NHC0 DDX43P3-201ENST00000441064 443 ntBASIC17.86■□□□□ 0.45
CAPN8A6NHC0 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CAPN8A6NHC0 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.86■□□□□ 0.45
CAPN8A6NHC0 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.86■□□□□ 0.45
CAPN8A6NHC0 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.86■□□□□ 0.45
CAPN8A6NHC0 BNIP3P18-201ENST00000593976 575 ntBASIC17.86■□□□□ 0.45
CAPN8A6NHC0 AC099336.1-202ENST00000602961 463 ntBASIC17.86■□□□□ 0.45
CAPN8A6NHC0 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CAPN8A6NHC0 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.86■□□□□ 0.45
CAPN8A6NHC0 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CAPN8A6NHC0 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CAPN8A6NHC0 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
CAPN8A6NHC0 AC009949.1-201ENST00000623048 1830 ntBASIC17.86■□□□□ 0.45
CAPN8A6NHC0 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
CAPN8A6NHC0 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.86■□□□□ 0.45
CAPN8A6NHC0 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CAPN8A6NHC0 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.86■□□□□ 0.45
CAPN8A6NHC0 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.86■□□□□ 0.45
CAPN8A6NHC0 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CAPN8A6NHC0 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.85■□□□□ 0.45
CAPN8A6NHC0 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CAPN8A6NHC0 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CAPN8A6NHC0 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CAPN8A6NHC0 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CAPN8A6NHC0 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CAPN8A6NHC0 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CAPN8A6NHC0 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CAPN8A6NHC0 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CAPN8A6NHC0 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CAPN8A6NHC0 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CAPN8A6NHC0 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.85■□□□□ 0.45
CAPN8A6NHC0 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CAPN8A6NHC0 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CAPN8A6NHC0 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CAPN8A6NHC0 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CAPN8A6NHC0 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CAPN8A6NHC0 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CAPN8A6NHC0 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
CAPN8A6NHC0 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CAPN8A6NHC0 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.85■□□□□ 0.45
CAPN8A6NHC0 NUS1P1-201ENST00000446295 882 ntBASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms