Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 PMS2P4-201ENST00000412466 1052 ntBASIC26.83■■□□□ 1.89
PLEKHD1A6NEE1 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC26.83■■□□□ 1.89
PLEKHD1A6NEE1 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
PLEKHD1A6NEE1 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC26.83■■□□□ 1.89
PLEKHD1A6NEE1 AC069335.1-201ENST00000489972 472 ntBASIC26.83■■□□□ 1.89
PLEKHD1A6NEE1 AC093214.1-201ENST00000511688 1107 ntBASIC26.83■■□□□ 1.89
PLEKHD1A6NEE1 AL512356.2-201ENST00000546955 174 ntBASIC26.83■■□□□ 1.89
PLEKHD1A6NEE1 AC051619.7-201ENST00000568314 623 ntBASIC26.83■■□□□ 1.89
PLEKHD1A6NEE1 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC26.83■■□□□ 1.89
PLEKHD1A6NEE1 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC26.83■■□□□ 1.89
PLEKHD1A6NEE1 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC26.83■■□□□ 1.89
PLEKHD1A6NEE1 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC26.83■■□□□ 1.89
PLEKHD1A6NEE1 BSG-214ENST00000614867 960 ntTSL 3 BASIC26.83■■□□□ 1.89
PLEKHD1A6NEE1 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC26.83■■□□□ 1.89
PLEKHD1A6NEE1 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC26.83■■□□□ 1.89
PLEKHD1A6NEE1 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC26.83■■□□□ 1.89
PLEKHD1A6NEE1 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
PLEKHD1A6NEE1 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
PLEKHD1A6NEE1 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC26.83■■□□□ 1.88
PLEKHD1A6NEE1 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
PLEKHD1A6NEE1 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
PLEKHD1A6NEE1 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC26.82■■□□□ 1.88
PLEKHD1A6NEE1 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC26.82■■□□□ 1.88
PLEKHD1A6NEE1 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
PLEKHD1A6NEE1 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
PLEKHD1A6NEE1 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
PLEKHD1A6NEE1 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC26.82■■□□□ 1.88
PLEKHD1A6NEE1 AL592309.1-201ENST00000443127 649 ntBASIC26.82■■□□□ 1.88
PLEKHD1A6NEE1 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC26.82■■□□□ 1.88
PLEKHD1A6NEE1 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
PLEKHD1A6NEE1 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC26.82■■□□□ 1.88
PLEKHD1A6NEE1 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC26.82■■□□□ 1.88
PLEKHD1A6NEE1 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC26.82■■□□□ 1.88
PLEKHD1A6NEE1 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC26.82■■□□□ 1.88
PLEKHD1A6NEE1 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC26.82■■□□□ 1.88
PLEKHD1A6NEE1 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC26.82■■□□□ 1.88
PLEKHD1A6NEE1 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
PLEKHD1A6NEE1 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC26.82■■□□□ 1.88
PLEKHD1A6NEE1 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC26.82■■□□□ 1.88
PLEKHD1A6NEE1 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC26.82■■□□□ 1.88
PLEKHD1A6NEE1 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC26.81■■□□□ 1.88
PLEKHD1A6NEE1 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
PLEKHD1A6NEE1 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
PLEKHD1A6NEE1 AMT-250ENST00000637682 1823 ntTSL 5 BASIC26.81■■□□□ 1.88
PLEKHD1A6NEE1 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC26.81■■□□□ 1.88
PLEKHD1A6NEE1 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC26.81■■□□□ 1.88
PLEKHD1A6NEE1 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
PLEKHD1A6NEE1 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
PLEKHD1A6NEE1 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC26.81■■□□□ 1.88
PLEKHD1A6NEE1 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC26.81■■□□□ 1.88
PLEKHD1A6NEE1 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC26.81■■□□□ 1.88
PLEKHD1A6NEE1 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC26.81■■□□□ 1.88
PLEKHD1A6NEE1 AC079140.1-201ENST00000508039 487 ntBASIC26.81■■□□□ 1.88
PLEKHD1A6NEE1 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC26.81■■□□□ 1.88
PLEKHD1A6NEE1 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
PLEKHD1A6NEE1 AF228730.6-201ENST00000641497 218 ntBASIC26.81■■□□□ 1.88
PLEKHD1A6NEE1 AC084121.3-201ENST00000641716 218 ntBASIC26.81■■□□□ 1.88
PLEKHD1A6NEE1 AL645728.2-201ENST00000641974 660 ntBASIC26.81■■□□□ 1.88
PLEKHD1A6NEE1 AC105233.6-201ENST00000642093 218 ntBASIC26.81■■□□□ 1.88
PLEKHD1A6NEE1 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
PLEKHD1A6NEE1 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
PLEKHD1A6NEE1 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC26.81■■□□□ 1.88
PLEKHD1A6NEE1 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
PLEKHD1A6NEE1 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
PLEKHD1A6NEE1 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC26.8■■□□□ 1.88
PLEKHD1A6NEE1 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC26.8■■□□□ 1.88
PLEKHD1A6NEE1 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
PLEKHD1A6NEE1 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
PLEKHD1A6NEE1 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
PLEKHD1A6NEE1 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC26.8■■□□□ 1.88
PLEKHD1A6NEE1 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC26.8■■□□□ 1.88
PLEKHD1A6NEE1 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC26.8■■□□□ 1.88
PLEKHD1A6NEE1 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC26.8■■□□□ 1.88
PLEKHD1A6NEE1 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
PLEKHD1A6NEE1 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC26.8■■□□□ 1.88
PLEKHD1A6NEE1 AC055876.3-201ENST00000431496 288 ntBASIC26.8■■□□□ 1.88
PLEKHD1A6NEE1 CNN2P2-201ENST00000443536 909 ntBASIC26.8■■□□□ 1.88
PLEKHD1A6NEE1 CNN2P3-201ENST00000450201 906 ntBASIC26.8■■□□□ 1.88
PLEKHD1A6NEE1 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC26.8■■□□□ 1.88
PLEKHD1A6NEE1 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
PLEKHD1A6NEE1 AC138649.4-201ENST00000612222 287 ntBASIC26.8■■□□□ 1.88
PLEKHD1A6NEE1 AL136317.3-201ENST00000618497 906 ntBASIC26.8■■□□□ 1.88
PLEKHD1A6NEE1 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC26.8■■□□□ 1.88
PLEKHD1A6NEE1 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC26.8■■□□□ 1.88
PLEKHD1A6NEE1 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC26.8■■□□□ 1.88
PLEKHD1A6NEE1 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
PLEKHD1A6NEE1 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
PLEKHD1A6NEE1 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
PLEKHD1A6NEE1 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC26.79■■□□□ 1.88
PLEKHD1A6NEE1 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
PLEKHD1A6NEE1 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
PLEKHD1A6NEE1 FAM58DP-201ENST00000428076 619 ntBASIC26.79■■□□□ 1.88
PLEKHD1A6NEE1 INGX-202ENST00000489074 768 ntBASIC26.79■■□□□ 1.88
PLEKHD1A6NEE1 AC243562.1-201ENST00000560672 389 ntBASIC26.79■■□□□ 1.88
PLEKHD1A6NEE1 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
PLEKHD1A6NEE1 BSG-215ENST00000618006 1329 ntTSL 2 BASIC26.79■■□□□ 1.88
PLEKHD1A6NEE1 AP000997.3-201ENST00000623333 2250 ntBASIC26.79■■□□□ 1.88
PLEKHD1A6NEE1 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC26.79■■□□□ 1.88
PLEKHD1A6NEE1 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC26.79■■□□□ 1.88
PLEKHD1A6NEE1 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC26.79■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms