Protein–RNA interactions for Protein: A6NDB9

PALM3, Paralemmin-3, humanhuman

Predicted RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PALM3A6NDB9 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.28■□□□□ 0.84
PALM3A6NDB9 FAM215A-202ENST00000632077 792 ntBASIC20.28■□□□□ 0.84
PALM3A6NDB9 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PALM3A6NDB9 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PALM3A6NDB9 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC20.28■□□□□ 0.84
PALM3A6NDB9 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PALM3A6NDB9 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PALM3A6NDB9 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC20.28■□□□□ 0.84
PALM3A6NDB9 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
PALM3A6NDB9 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PALM3A6NDB9 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PALM3A6NDB9 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PALM3A6NDB9 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PALM3A6NDB9 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PALM3A6NDB9 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC20.27■□□□□ 0.84
PALM3A6NDB9 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC20.27■□□□□ 0.84
PALM3A6NDB9 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PALM3A6NDB9 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
PALM3A6NDB9 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
PALM3A6NDB9 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PALM3A6NDB9 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
PALM3A6NDB9 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PALM3A6NDB9 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PALM3A6NDB9 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PALM3A6NDB9 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PALM3A6NDB9 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
PALM3A6NDB9 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PALM3A6NDB9 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
PALM3A6NDB9 ENSA-206ENST00000361631 725 ntTSL 2 BASIC20.27■□□□□ 0.84
PALM3A6NDB9 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PALM3A6NDB9 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC20.27■□□□□ 0.84
PALM3A6NDB9 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.27■□□□□ 0.84
PALM3A6NDB9 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.27■□□□□ 0.84
PALM3A6NDB9 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.27■□□□□ 0.84
PALM3A6NDB9 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC20.27■□□□□ 0.84
PALM3A6NDB9 AL049840.3-201ENST00000602669 611 ntBASIC20.27■□□□□ 0.84
PALM3A6NDB9 AC107918.4-202ENST00000641623 219 ntBASIC20.27■□□□□ 0.84
PALM3A6NDB9 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PALM3A6NDB9 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PALM3A6NDB9 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PALM3A6NDB9 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PALM3A6NDB9 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PALM3A6NDB9 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PALM3A6NDB9 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PALM3A6NDB9 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.27■□□□□ 0.83
PALM3A6NDB9 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20.27■□□□□ 0.83
PALM3A6NDB9 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
PALM3A6NDB9 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PALM3A6NDB9 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PALM3A6NDB9 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.26■□□□□ 0.83
PALM3A6NDB9 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
PALM3A6NDB9 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
PALM3A6NDB9 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PALM3A6NDB9 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PALM3A6NDB9 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PALM3A6NDB9 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PALM3A6NDB9 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PALM3A6NDB9 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PALM3A6NDB9 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.26■□□□□ 0.83
PALM3A6NDB9 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.26■□□□□ 0.83
PALM3A6NDB9 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PALM3A6NDB9 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PALM3A6NDB9 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PALM3A6NDB9 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.26■□□□□ 0.83
PALM3A6NDB9 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.26■□□□□ 0.83
PALM3A6NDB9 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.26■□□□□ 0.83
PALM3A6NDB9 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
PALM3A6NDB9 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PALM3A6NDB9 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.26■□□□□ 0.83
PALM3A6NDB9 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PALM3A6NDB9 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PALM3A6NDB9 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC20.26■□□□□ 0.83
PALM3A6NDB9 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PALM3A6NDB9 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PALM3A6NDB9 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PALM3A6NDB9 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.26■□□□□ 0.83
PALM3A6NDB9 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC20.26■□□□□ 0.83
PALM3A6NDB9 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.25■□□□□ 0.83
PALM3A6NDB9 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PALM3A6NDB9 AC046185.3-201ENST00000623228 1824 ntBASIC20.25■□□□□ 0.83
PALM3A6NDB9 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
PALM3A6NDB9 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PALM3A6NDB9 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PALM3A6NDB9 HCG11-201ENST00000411553 5696 ntBASIC20.25■□□□□ 0.83
PALM3A6NDB9 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PALM3A6NDB9 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PALM3A6NDB9 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PALM3A6NDB9 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PALM3A6NDB9 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.25■□□□□ 0.83
PALM3A6NDB9 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PALM3A6NDB9 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PALM3A6NDB9 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.25■□□□□ 0.83
PALM3A6NDB9 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.25■□□□□ 0.83
PALM3A6NDB9 OR7E14P-202ENST00000530490 1290 ntBASIC20.25■□□□□ 0.83
PALM3A6NDB9 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
PALM3A6NDB9 AP001005.1-201ENST00000571755 1248 ntBASIC20.25■□□□□ 0.83
PALM3A6NDB9 MIR7706-201ENST00000613747 67 ntBASIC20.25■□□□□ 0.83
PALM3A6NDB9 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.25■□□□□ 0.83
PALM3A6NDB9 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PALM3A6NDB9 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms