Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SHISA3A0PJX4 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.34■□□□□ 0.05
SHISA3A0PJX4 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
SHISA3A0PJX4 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SHISA3A0PJX4 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SHISA3A0PJX4 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SHISA3A0PJX4 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SHISA3A0PJX4 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
SHISA3A0PJX4 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SHISA3A0PJX4 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SHISA3A0PJX4 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SHISA3A0PJX4 AL355355.2-201ENST00000442321 338 ntBASIC15.34■□□□□ 0.05
SHISA3A0PJX4 TSPY20P-201ENST00000450910 630 ntBASIC15.34■□□□□ 0.05
SHISA3A0PJX4 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SHISA3A0PJX4 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.34■□□□□ 0.05
SHISA3A0PJX4 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SHISA3A0PJX4 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC15.34■□□□□ 0.05
SHISA3A0PJX4 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC15.34■□□□□ 0.05
SHISA3A0PJX4 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SHISA3A0PJX4 TMEM191A-211ENST00000637163 1067 ntBASIC15.34■□□□□ 0.05
SHISA3A0PJX4 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SHISA3A0PJX4 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SHISA3A0PJX4 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SHISA3A0PJX4 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
SHISA3A0PJX4 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SHISA3A0PJX4 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SHISA3A0PJX4 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SHISA3A0PJX4 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SHISA3A0PJX4 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.34■□□□□ 0.05
SHISA3A0PJX4 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SHISA3A0PJX4 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SHISA3A0PJX4 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.34■□□□□ 0.05
SHISA3A0PJX4 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SHISA3A0PJX4 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SHISA3A0PJX4 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SHISA3A0PJX4 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.34■□□□□ 0.05
SHISA3A0PJX4 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SHISA3A0PJX4 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.34■□□□□ 0.05
SHISA3A0PJX4 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.05
SHISA3A0PJX4 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
SHISA3A0PJX4 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SHISA3A0PJX4 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.33■□□□□ 0.05
SHISA3A0PJX4 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
SHISA3A0PJX4 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
SHISA3A0PJX4 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SHISA3A0PJX4 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.33■□□□□ 0.04
SHISA3A0PJX4 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.33■□□□□ 0.04
SHISA3A0PJX4 HYMAI-201ENST00000635591 3347 ntBASIC15.33■□□□□ 0.04
SHISA3A0PJX4 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
SHISA3A0PJX4 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC15.33■□□□□ 0.04
SHISA3A0PJX4 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
SHISA3A0PJX4 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
SHISA3A0PJX4 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC15.33■□□□□ 0.04
SHISA3A0PJX4 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC15.33■□□□□ 0.04
SHISA3A0PJX4 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
SHISA3A0PJX4 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SHISA3A0PJX4 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC15.33■□□□□ 0.04
SHISA3A0PJX4 AP005242.2-201ENST00000580065 1175 ntBASIC15.33■□□□□ 0.04
SHISA3A0PJX4 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SHISA3A0PJX4 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC15.33■□□□□ 0.04
SHISA3A0PJX4 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
SHISA3A0PJX4 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SHISA3A0PJX4 AC093525.9-201ENST00000624961 1746 ntBASIC15.33■□□□□ 0.04
SHISA3A0PJX4 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SHISA3A0PJX4 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SHISA3A0PJX4 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.33■□□□□ 0.04
SHISA3A0PJX4 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
SHISA3A0PJX4 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SHISA3A0PJX4 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SHISA3A0PJX4 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
SHISA3A0PJX4 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SHISA3A0PJX4 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
SHISA3A0PJX4 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SHISA3A0PJX4 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SHISA3A0PJX4 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SHISA3A0PJX4 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.32■□□□□ 0.04
SHISA3A0PJX4 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHISA3A0PJX4 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
SHISA3A0PJX4 AC092364.2-201ENST00000596710 2692 ntBASIC15.32■□□□□ 0.04
SHISA3A0PJX4 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHISA3A0PJX4 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHISA3A0PJX4 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SHISA3A0PJX4 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SHISA3A0PJX4 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHISA3A0PJX4 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SHISA3A0PJX4 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHISA3A0PJX4 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SHISA3A0PJX4 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SHISA3A0PJX4 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SHISA3A0PJX4 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SHISA3A0PJX4 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHISA3A0PJX4 GRAMD4P1-201ENST00000435181 1110 ntBASIC15.32■□□□□ 0.04
SHISA3A0PJX4 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SHISA3A0PJX4 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC15.32■□□□□ 0.04
SHISA3A0PJX4 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC15.32■□□□□ 0.04
SHISA3A0PJX4 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC15.32■□□□□ 0.04
SHISA3A0PJX4 AL139327.4-201ENST00000612362 153 ntBASIC15.32■□□□□ 0.04
SHISA3A0PJX4 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC15.32■□□□□ 0.04
SHISA3A0PJX4 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC15.32■□□□□ 0.04
SHISA3A0PJX4 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms