Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.88■□□□□ 0.45
TCRBV7S3A2A0A539 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.88■□□□□ 0.45
TCRBV7S3A2A0A539 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TCRBV7S3A2A0A539 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.88■□□□□ 0.45
TCRBV7S3A2A0A539 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TCRBV7S3A2A0A539 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.88■□□□□ 0.45
TCRBV7S3A2A0A539 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TCRBV7S3A2A0A539 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
TCRBV7S3A2A0A539 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TCRBV7S3A2A0A539 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TCRBV7S3A2A0A539 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TCRBV7S3A2A0A539 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TCRBV7S3A2A0A539 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TCRBV7S3A2A0A539 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TCRBV7S3A2A0A539 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TCRBV7S3A2A0A539 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
TCRBV7S3A2A0A539 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.87■□□□□ 0.45
TCRBV7S3A2A0A539 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TCRBV7S3A2A0A539 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.87■□□□□ 0.45
TCRBV7S3A2A0A539 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TCRBV7S3A2A0A539 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.87■□□□□ 0.45
TCRBV7S3A2A0A539 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TCRBV7S3A2A0A539 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TCRBV7S3A2A0A539 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
TCRBV7S3A2A0A539 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TCRBV7S3A2A0A539 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TCRBV7S3A2A0A539 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TCRBV7S3A2A0A539 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TCRBV7S3A2A0A539 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
TCRBV7S3A2A0A539 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
TCRBV7S3A2A0A539 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TCRBV7S3A2A0A539 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.87■□□□□ 0.45
TCRBV7S3A2A0A539 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
TCRBV7S3A2A0A539 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TCRBV7S3A2A0A539 AC092647.4-201ENST00000457211 535 ntBASIC17.87■□□□□ 0.45
TCRBV7S3A2A0A539 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.87■□□□□ 0.45
TCRBV7S3A2A0A539 AC063952.2-201ENST00000498792 1227 ntBASIC17.87■□□□□ 0.45
TCRBV7S3A2A0A539 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TCRBV7S3A2A0A539 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TCRBV7S3A2A0A539 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.87■□□□□ 0.45
TCRBV7S3A2A0A539 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TCRBV7S3A2A0A539 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TCRBV7S3A2A0A539 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TCRBV7S3A2A0A539 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TCRBV7S3A2A0A539 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TCRBV7S3A2A0A539 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.87■□□□□ 0.45
TCRBV7S3A2A0A539 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
TCRBV7S3A2A0A539 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
TCRBV7S3A2A0A539 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TCRBV7S3A2A0A539 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TCRBV7S3A2A0A539 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TCRBV7S3A2A0A539 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TCRBV7S3A2A0A539 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TCRBV7S3A2A0A539 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TCRBV7S3A2A0A539 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TCRBV7S3A2A0A539 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.86■□□□□ 0.45
TCRBV7S3A2A0A539 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TCRBV7S3A2A0A539 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TCRBV7S3A2A0A539 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.86■□□□□ 0.45
TCRBV7S3A2A0A539 AL845331.1-201ENST00000424978 1190 ntBASIC17.86■□□□□ 0.45
TCRBV7S3A2A0A539 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.86■□□□□ 0.45
TCRBV7S3A2A0A539 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.86■□□□□ 0.45
TCRBV7S3A2A0A539 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.86■□□□□ 0.45
TCRBV7S3A2A0A539 AC019129.2-201ENST00000609837 1235 ntBASIC17.86■□□□□ 0.45
TCRBV7S3A2A0A539 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.86■□□□□ 0.45
TCRBV7S3A2A0A539 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.86■□□□□ 0.45
TCRBV7S3A2A0A539 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.86■□□□□ 0.45
TCRBV7S3A2A0A539 UBALD1-205ENST00000590891 2641 ntBASIC17.86■□□□□ 0.45
TCRBV7S3A2A0A539 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TCRBV7S3A2A0A539 AC097374.2-201ENST00000618617 1306 ntBASIC17.86■□□□□ 0.45
TCRBV7S3A2A0A539 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TCRBV7S3A2A0A539 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TCRBV7S3A2A0A539 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.86■□□□□ 0.45
TCRBV7S3A2A0A539 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TCRBV7S3A2A0A539 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
TCRBV7S3A2A0A539 HCG11-201ENST00000411553 5696 ntBASIC17.86■□□□□ 0.45
TCRBV7S3A2A0A539 AC092053.1-201ENST00000605787 1936 ntBASIC17.86■□□□□ 0.45
TCRBV7S3A2A0A539 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TCRBV7S3A2A0A539 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TCRBV7S3A2A0A539 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TCRBV7S3A2A0A539 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
TCRBV7S3A2A0A539 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TCRBV7S3A2A0A539 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TCRBV7S3A2A0A539 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TCRBV7S3A2A0A539 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TCRBV7S3A2A0A539 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.85■□□□□ 0.45
TCRBV7S3A2A0A539 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TCRBV7S3A2A0A539 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.85■□□□□ 0.45
TCRBV7S3A2A0A539 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TCRBV7S3A2A0A539 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.85■□□□□ 0.45
TCRBV7S3A2A0A539 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TCRBV7S3A2A0A539 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
TCRBV7S3A2A0A539 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TCRBV7S3A2A0A539 AC007967.3-201ENST00000434308 558 ntBASIC17.85■□□□□ 0.45
TCRBV7S3A2A0A539 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TCRBV7S3A2A0A539 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.85■□□□□ 0.45
TCRBV7S3A2A0A539 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.85■□□□□ 0.45
TCRBV7S3A2A0A539 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.85■□□□□ 0.45
TCRBV7S3A2A0A539 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
TCRBV7S3A2A0A539 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms