Protein–RNA interactions for Protein: A0A1W2PRY6

SMIM27, Small integral membrane protein 27 (Fragment), humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM27A0A1W2PRY6 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM27A0A1W2PRY6 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM27A0A1W2PRY6 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM27A0A1W2PRY6 PPP1R14BP5-201ENST00000440334 435 ntBASIC13.15□□□□□ -0.3
SMIM27A0A1W2PRY6 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC13.15□□□□□ -0.3
SMIM27A0A1W2PRY6 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM27A0A1W2PRY6 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC13.15□□□□□ -0.3
SMIM27A0A1W2PRY6 AC011298.2-201ENST00000617989 482 ntBASIC13.15□□□□□ -0.3
SMIM27A0A1W2PRY6 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM27A0A1W2PRY6 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM27A0A1W2PRY6 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM27A0A1W2PRY6 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC13.15□□□□□ -0.3
SMIM27A0A1W2PRY6 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM27A0A1W2PRY6 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
SMIM27A0A1W2PRY6 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
SMIM27A0A1W2PRY6 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.15□□□□□ -0.31
SMIM27A0A1W2PRY6 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC13.14□□□□□ -0.31
SMIM27A0A1W2PRY6 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM27A0A1W2PRY6 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.14□□□□□ -0.31
SMIM27A0A1W2PRY6 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM27A0A1W2PRY6 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM27A0A1W2PRY6 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM27A0A1W2PRY6 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM27A0A1W2PRY6 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
SMIM27A0A1W2PRY6 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM27A0A1W2PRY6 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM27A0A1W2PRY6 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
SMIM27A0A1W2PRY6 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
SMIM27A0A1W2PRY6 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC13.14□□□□□ -0.31
SMIM27A0A1W2PRY6 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM27A0A1W2PRY6 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM27A0A1W2PRY6 AC092053.1-201ENST00000605787 1936 ntBASIC13.14□□□□□ -0.31
SMIM27A0A1W2PRY6 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM27A0A1W2PRY6 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM27A0A1W2PRY6 BUB3-202ENST00000368859 667 ntTSL 3 BASIC13.14□□□□□ -0.31
SMIM27A0A1W2PRY6 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM27A0A1W2PRY6 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC13.14□□□□□ -0.31
SMIM27A0A1W2PRY6 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC13.14□□□□□ -0.31
SMIM27A0A1W2PRY6 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM27A0A1W2PRY6 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC13.14□□□□□ -0.31
SMIM27A0A1W2PRY6 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
SMIM27A0A1W2PRY6 TK2-208ENST00000545043 1120 ntTSL 2 BASIC13.14□□□□□ -0.31
SMIM27A0A1W2PRY6 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC13.14□□□□□ -0.31
SMIM27A0A1W2PRY6 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC13.14□□□□□ -0.31
SMIM27A0A1W2PRY6 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC13.14□□□□□ -0.31
SMIM27A0A1W2PRY6 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC13.14□□□□□ -0.31
SMIM27A0A1W2PRY6 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC13.14□□□□□ -0.31
SMIM27A0A1W2PRY6 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM27A0A1W2PRY6 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC13.14□□□□□ -0.31
SMIM27A0A1W2PRY6 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM27A0A1W2PRY6 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM27A0A1W2PRY6 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM27A0A1W2PRY6 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM27A0A1W2PRY6 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
SMIM27A0A1W2PRY6 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
SMIM27A0A1W2PRY6 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM27A0A1W2PRY6 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM27A0A1W2PRY6 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM27A0A1W2PRY6 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM27A0A1W2PRY6 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM27A0A1W2PRY6 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM27A0A1W2PRY6 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM27A0A1W2PRY6 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
SMIM27A0A1W2PRY6 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM27A0A1W2PRY6 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM27A0A1W2PRY6 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM27A0A1W2PRY6 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM27A0A1W2PRY6 AC079328.2-201ENST00000561241 3354 ntBASIC13.14□□□□□ -0.31
SMIM27A0A1W2PRY6 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM27A0A1W2PRY6 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM27A0A1W2PRY6 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM27A0A1W2PRY6 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM27A0A1W2PRY6 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC13.13□□□□□ -0.31
SMIM27A0A1W2PRY6 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC13.13□□□□□ -0.31
SMIM27A0A1W2PRY6 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.13□□□□□ -0.31
SMIM27A0A1W2PRY6 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
SMIM27A0A1W2PRY6 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
SMIM27A0A1W2PRY6 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
SMIM27A0A1W2PRY6 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM27A0A1W2PRY6 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM27A0A1W2PRY6 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM27A0A1W2PRY6 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM27A0A1W2PRY6 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
SMIM27A0A1W2PRY6 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM27A0A1W2PRY6 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM27A0A1W2PRY6 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
SMIM27A0A1W2PRY6 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM27A0A1W2PRY6 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
SMIM27A0A1W2PRY6 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM27A0A1W2PRY6 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC13.13□□□□□ -0.31
SMIM27A0A1W2PRY6 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
SMIM27A0A1W2PRY6 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM27A0A1W2PRY6 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM27A0A1W2PRY6 MIR638-201ENST00000385237 100 ntBASIC13.13□□□□□ -0.31
SMIM27A0A1W2PRY6 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
SMIM27A0A1W2PRY6 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC13.13□□□□□ -0.31
SMIM27A0A1W2PRY6 KRT18P23-201ENST00000435622 1283 ntBASIC13.13□□□□□ -0.31
SMIM27A0A1W2PRY6 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC13.13□□□□□ -0.31
SMIM27A0A1W2PRY6 FAM207BP-201ENST00000447172 505 ntBASIC13.13□□□□□ -0.31
SMIM27A0A1W2PRY6 KRT16P5-201ENST00000455284 522 ntBASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms