Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 AC084018.2-201ENST00000613093 2607 ntBASIC12.02□□□□□ -0.49
LINC00959A0A1B0GUT2 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00959A0A1B0GUT2 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00959A0A1B0GUT2 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC12.02□□□□□ -0.49
LINC00959A0A1B0GUT2 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
LINC00959A0A1B0GUT2 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00959A0A1B0GUT2 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00959A0A1B0GUT2 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00959A0A1B0GUT2 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
LINC00959A0A1B0GUT2 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00959A0A1B0GUT2 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
LINC00959A0A1B0GUT2 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC12.01□□□□□ -0.49
LINC00959A0A1B0GUT2 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00959A0A1B0GUT2 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00959A0A1B0GUT2 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC12.01□□□□□ -0.49
LINC00959A0A1B0GUT2 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00959A0A1B0GUT2 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00959A0A1B0GUT2 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00959A0A1B0GUT2 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00959A0A1B0GUT2 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00959A0A1B0GUT2 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00959A0A1B0GUT2 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00959A0A1B0GUT2 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00959A0A1B0GUT2 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00959A0A1B0GUT2 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
LINC00959A0A1B0GUT2 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00959A0A1B0GUT2 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00959A0A1B0GUT2 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00959A0A1B0GUT2 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC12.01□□□□□ -0.49
LINC00959A0A1B0GUT2 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC12.01□□□□□ -0.49
LINC00959A0A1B0GUT2 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00959A0A1B0GUT2 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00959A0A1B0GUT2 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00959A0A1B0GUT2 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00959A0A1B0GUT2 ANKRD20A18P-201ENST00000359341 492 ntBASIC12.01□□□□□ -0.49
LINC00959A0A1B0GUT2 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00959A0A1B0GUT2 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00959A0A1B0GUT2 DDT-203ENST00000403754 569 ntTSL 3 BASIC12.01□□□□□ -0.49
LINC00959A0A1B0GUT2 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00959A0A1B0GUT2 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00959A0A1B0GUT2 DDT-206ENST00000430101 573 ntTSL 2 BASIC12.01□□□□□ -0.49
LINC00959A0A1B0GUT2 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
LINC00959A0A1B0GUT2 AC145285.6-201ENST00000604632 637 ntBASIC12.01□□□□□ -0.49
LINC00959A0A1B0GUT2 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00959A0A1B0GUT2 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00959A0A1B0GUT2 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00959A0A1B0GUT2 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC12.01□□□□□ -0.49
LINC00959A0A1B0GUT2 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00959A0A1B0GUT2 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00959A0A1B0GUT2 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC12.01□□□□□ -0.49
LINC00959A0A1B0GUT2 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00959A0A1B0GUT2 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
LINC00959A0A1B0GUT2 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00959A0A1B0GUT2 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00959A0A1B0GUT2 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00959A0A1B0GUT2 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00959A0A1B0GUT2 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00959A0A1B0GUT2 AC011676.5-201ENST00000624864 2660 ntBASIC12.01□□□□□ -0.49
LINC00959A0A1B0GUT2 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00959A0A1B0GUT2 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00959A0A1B0GUT2 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00959A0A1B0GUT2 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
LINC00959A0A1B0GUT2 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00959A0A1B0GUT2 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00959A0A1B0GUT2 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00959A0A1B0GUT2 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
LINC00959A0A1B0GUT2 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC12□□□□□ -0.49
LINC00959A0A1B0GUT2 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00959A0A1B0GUT2 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC12□□□□□ -0.49
LINC00959A0A1B0GUT2 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00959A0A1B0GUT2 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00959A0A1B0GUT2 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00959A0A1B0GUT2 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00959A0A1B0GUT2 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
LINC00959A0A1B0GUT2 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC12□□□□□ -0.49
LINC00959A0A1B0GUT2 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00959A0A1B0GUT2 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC12□□□□□ -0.49
LINC00959A0A1B0GUT2 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
LINC00959A0A1B0GUT2 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00959A0A1B0GUT2 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
LINC00959A0A1B0GUT2 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00959A0A1B0GUT2 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC12□□□□□ -0.49
LINC00959A0A1B0GUT2 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00959A0A1B0GUT2 LYSMD4-203ENST00000378904 2122 ntBASIC12□□□□□ -0.49
LINC00959A0A1B0GUT2 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC12□□□□□ -0.49
LINC00959A0A1B0GUT2 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC12□□□□□ -0.49
LINC00959A0A1B0GUT2 AC005104.2-201ENST00000427818 678 ntBASIC12□□□□□ -0.49
LINC00959A0A1B0GUT2 HLA-F-220ENST00000434407 884 ntBASIC12□□□□□ -0.49
LINC00959A0A1B0GUT2 SLC25A3P1-201ENST00000443844 931 ntBASIC12□□□□□ -0.49
LINC00959A0A1B0GUT2 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00959A0A1B0GUT2 COX11P1-201ENST00000489116 835 ntBASIC12□□□□□ -0.49
LINC00959A0A1B0GUT2 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
LINC00959A0A1B0GUT2 DET1-205ENST00000558413 583 ntTSL 4 BASIC12□□□□□ -0.49
LINC00959A0A1B0GUT2 DUT-205ENST00000558813 769 ntTSL 2 BASIC12□□□□□ -0.49
LINC00959A0A1B0GUT2 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC12□□□□□ -0.49
LINC00959A0A1B0GUT2 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00959A0A1B0GUT2 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00959A0A1B0GUT2 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00959A0A1B0GUT2 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC12□□□□□ -0.49
LINC00959A0A1B0GUT2 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms