Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV6-7A0A0A0MS04 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV6-7A0A0A0MS04 TK1-205ENST00000590862 642 ntTSL 3 BASIC14.75□□□□□ -0.05
TRBV6-7A0A0A0MS04 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC14.75□□□□□ -0.05
TRBV6-7A0A0A0MS04 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.75□□□□□ -0.05
TRBV6-7A0A0A0MS04 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV6-7A0A0A0MS04 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV6-7A0A0A0MS04 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV6-7A0A0A0MS04 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV6-7A0A0A0MS04 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV6-7A0A0A0MS04 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV6-7A0A0A0MS04 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV6-7A0A0A0MS04 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV6-7A0A0A0MS04 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
TRBV6-7A0A0A0MS04 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV6-7A0A0A0MS04 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.75□□□□□ -0.05
TRBV6-7A0A0A0MS04 AC026691.1-201ENST00000602502 2017 ntBASIC14.75□□□□□ -0.05
TRBV6-7A0A0A0MS04 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV6-7A0A0A0MS04 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
TRBV6-7A0A0A0MS04 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
TRBV6-7A0A0A0MS04 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
TRBV6-7A0A0A0MS04 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV6-7A0A0A0MS04 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV6-7A0A0A0MS04 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV6-7A0A0A0MS04 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV6-7A0A0A0MS04 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV6-7A0A0A0MS04 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.74□□□□□ -0.05
TRBV6-7A0A0A0MS04 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV6-7A0A0A0MS04 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
TRBV6-7A0A0A0MS04 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV6-7A0A0A0MS04 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV6-7A0A0A0MS04 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14.74□□□□□ -0.05
TRBV6-7A0A0A0MS04 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV6-7A0A0A0MS04 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV6-7A0A0A0MS04 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV6-7A0A0A0MS04 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
TRBV6-7A0A0A0MS04 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV6-7A0A0A0MS04 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV6-7A0A0A0MS04 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV6-7A0A0A0MS04 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV6-7A0A0A0MS04 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
TRBV6-7A0A0A0MS04 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC14.74□□□□□ -0.05
TRBV6-7A0A0A0MS04 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV6-7A0A0A0MS04 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
TRBV6-7A0A0A0MS04 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV6-7A0A0A0MS04 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
TRBV6-7A0A0A0MS04 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV6-7A0A0A0MS04 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV6-7A0A0A0MS04 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC14.74□□□□□ -0.05
TRBV6-7A0A0A0MS04 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC14.74□□□□□ -0.05
TRBV6-7A0A0A0MS04 CD81-212ENST00000526072 1172 ntTSL 5 BASIC14.74□□□□□ -0.05
TRBV6-7A0A0A0MS04 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC14.74□□□□□ -0.05
TRBV6-7A0A0A0MS04 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC14.74□□□□□ -0.05
TRBV6-7A0A0A0MS04 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC14.74□□□□□ -0.05
TRBV6-7A0A0A0MS04 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV6-7A0A0A0MS04 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
TRBV6-7A0A0A0MS04 AC141257.4-201ENST00000634557 245 ntBASIC14.74□□□□□ -0.05
TRBV6-7A0A0A0MS04 AC136944.6-201ENST00000634818 245 ntBASIC14.74□□□□□ -0.05
TRBV6-7A0A0A0MS04 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV6-7A0A0A0MS04 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC14.74□□□□□ -0.05
TRBV6-7A0A0A0MS04 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV6-7A0A0A0MS04 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV6-7A0A0A0MS04 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV6-7A0A0A0MS04 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV6-7A0A0A0MS04 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV6-7A0A0A0MS04 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.74□□□□□ -0.05
TRBV6-7A0A0A0MS04 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV6-7A0A0A0MS04 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
TRBV6-7A0A0A0MS04 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC14.74□□□□□ -0.05
TRBV6-7A0A0A0MS04 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV6-7A0A0A0MS04 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.74□□□□□ -0.05
TRBV6-7A0A0A0MS04 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV6-7A0A0A0MS04 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRBV6-7A0A0A0MS04 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRBV6-7A0A0A0MS04 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRBV6-7A0A0A0MS04 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRBV6-7A0A0A0MS04 AC103702.1-201ENST00000548801 2630 ntBASIC14.73□□□□□ -0.05
TRBV6-7A0A0A0MS04 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.73□□□□□ -0.05
TRBV6-7A0A0A0MS04 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
TRBV6-7A0A0A0MS04 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
TRBV6-7A0A0A0MS04 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
TRBV6-7A0A0A0MS04 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRBV6-7A0A0A0MS04 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC14.73□□□□□ -0.05
TRBV6-7A0A0A0MS04 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC14.73□□□□□ -0.05
TRBV6-7A0A0A0MS04 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC14.73□□□□□ -0.05
TRBV6-7A0A0A0MS04 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC14.73□□□□□ -0.05
TRBV6-7A0A0A0MS04 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRBV6-7A0A0A0MS04 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC14.73□□□□□ -0.05
TRBV6-7A0A0A0MS04 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRBV6-7A0A0A0MS04 GCSHP2-201ENST00000560971 527 ntBASIC14.73□□□□□ -0.05
TRBV6-7A0A0A0MS04 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC14.73□□□□□ -0.05
TRBV6-7A0A0A0MS04 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRBV6-7A0A0A0MS04 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.73□□□□□ -0.05
TRBV6-7A0A0A0MS04 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRBV6-7A0A0A0MS04 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC14.73□□□□□ -0.05
TRBV6-7A0A0A0MS04 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRBV6-7A0A0A0MS04 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
TRBV6-7A0A0A0MS04 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14.73□□□□□ -0.05
TRBV6-7A0A0A0MS04 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.73□□□□□ -0.05
TRBV6-7A0A0A0MS04 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms