Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRGV1A0A0A0MS02 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRGV1A0A0A0MS02 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
TRGV1A0A0A0MS02 BAALC-202ENST00000306391 243 ntTSL 5 BASIC12.81□□□□□ -0.36
TRGV1A0A0A0MS02 BAALC-204ENST00000330955 222 ntTSL 5 BASIC12.81□□□□□ -0.36
TRGV1A0A0A0MS02 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TRGV1A0A0A0MS02 SAPCD2P2-201ENST00000431719 1174 ntBASIC12.81□□□□□ -0.36
TRGV1A0A0A0MS02 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC12.81□□□□□ -0.36
TRGV1A0A0A0MS02 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC12.81□□□□□ -0.36
TRGV1A0A0A0MS02 AC112698.1-201ENST00000510299 916 ntBASIC12.81□□□□□ -0.36
TRGV1A0A0A0MS02 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC12.81□□□□□ -0.36
TRGV1A0A0A0MS02 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRGV1A0A0A0MS02 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC12.81□□□□□ -0.36
TRGV1A0A0A0MS02 AC083849.1-201ENST00000615227 514 ntBASIC12.81□□□□□ -0.36
TRGV1A0A0A0MS02 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC12.81□□□□□ -0.36
TRGV1A0A0A0MS02 DFFB-212ENST00000625756 649 ntTSL 5 BASIC12.81□□□□□ -0.36
TRGV1A0A0A0MS02 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRGV1A0A0A0MS02 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC12.81□□□□□ -0.36
TRGV1A0A0A0MS02 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
TRGV1A0A0A0MS02 LTB4R2-202ENST00000528054 3092 ntBASIC12.81□□□□□ -0.36
TRGV1A0A0A0MS02 UBC-206ENST00000538617 1303 ntTSL 5 BASIC12.81□□□□□ -0.36
TRGV1A0A0A0MS02 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
TRGV1A0A0A0MS02 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRGV1A0A0A0MS02 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRGV1A0A0A0MS02 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRGV1A0A0A0MS02 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
TRGV1A0A0A0MS02 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRGV1A0A0A0MS02 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC12.81□□□□□ -0.36
TRGV1A0A0A0MS02 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRGV1A0A0A0MS02 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRGV1A0A0A0MS02 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC12.8□□□□□ -0.36
TRGV1A0A0A0MS02 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRGV1A0A0A0MS02 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRGV1A0A0A0MS02 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC12.8□□□□□ -0.36
TRGV1A0A0A0MS02 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRGV1A0A0A0MS02 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRGV1A0A0A0MS02 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
TRGV1A0A0A0MS02 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRGV1A0A0A0MS02 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRGV1A0A0A0MS02 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRGV1A0A0A0MS02 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC12.8□□□□□ -0.36
TRGV1A0A0A0MS02 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRGV1A0A0A0MS02 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRGV1A0A0A0MS02 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRGV1A0A0A0MS02 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
TRGV1A0A0A0MS02 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRGV1A0A0A0MS02 EML3-212ENST00000494176 2901 ntTSL 2 BASIC12.8□□□□□ -0.36
TRGV1A0A0A0MS02 EML3-216ENST00000529309 2909 ntTSL 2 BASIC12.8□□□□□ -0.36
TRGV1A0A0A0MS02 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRGV1A0A0A0MS02 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRGV1A0A0A0MS02 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
TRGV1A0A0A0MS02 MED29-202ENST00000594368 1471 ntTSL 2 BASIC12.8□□□□□ -0.36
TRGV1A0A0A0MS02 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRGV1A0A0A0MS02 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRGV1A0A0A0MS02 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRGV1A0A0A0MS02 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRGV1A0A0A0MS02 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRGV1A0A0A0MS02 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRGV1A0A0A0MS02 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRGV1A0A0A0MS02 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRGV1A0A0A0MS02 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRGV1A0A0A0MS02 DAP-202ENST00000432074 1048 ntTSL 2 BASIC12.8□□□□□ -0.36
TRGV1A0A0A0MS02 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
TRGV1A0A0A0MS02 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC12.8□□□□□ -0.36
TRGV1A0A0A0MS02 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC12.8□□□□□ -0.36
TRGV1A0A0A0MS02 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC12.8□□□□□ -0.36
TRGV1A0A0A0MS02 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC12.8□□□□□ -0.36
TRGV1A0A0A0MS02 AL390719.2-201ENST00000606993 987 ntBASIC12.8□□□□□ -0.36
TRGV1A0A0A0MS02 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRGV1A0A0A0MS02 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRGV1A0A0A0MS02 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
TRGV1A0A0A0MS02 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRGV1A0A0A0MS02 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRGV1A0A0A0MS02 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRGV1A0A0A0MS02 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRGV1A0A0A0MS02 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
TRGV1A0A0A0MS02 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRGV1A0A0A0MS02 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRGV1A0A0A0MS02 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRGV1A0A0A0MS02 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
TRGV1A0A0A0MS02 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRGV1A0A0A0MS02 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC12.79□□□□□ -0.36
TRGV1A0A0A0MS02 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
TRGV1A0A0A0MS02 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRGV1A0A0A0MS02 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRGV1A0A0A0MS02 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRGV1A0A0A0MS02 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRGV1A0A0A0MS02 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRGV1A0A0A0MS02 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
TRGV1A0A0A0MS02 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC12.79□□□□□ -0.36
TRGV1A0A0A0MS02 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRGV1A0A0A0MS02 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
TRGV1A0A0A0MS02 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC12.79□□□□□ -0.36
TRGV1A0A0A0MS02 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRGV1A0A0A0MS02 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC12.79□□□□□ -0.36
TRGV1A0A0A0MS02 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC12.79□□□□□ -0.36
TRGV1A0A0A0MS02 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC12.79□□□□□ -0.36
TRGV1A0A0A0MS02 LTBR-211ENST00000543190 785 ntTSL 3 BASIC12.79□□□□□ -0.36
TRGV1A0A0A0MS02 RNF126P1-202ENST00000569893 925 ntBASIC12.79□□□□□ -0.36
TRGV1A0A0A0MS02 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms