Protein–RNA interactions for Protein: Q9Y6Q1

CAPN6, Calpain-6, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN6Q9Y6Q1 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN6Q9Y6Q1 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.65■□□□□ 0.58
CAPN6Q9Y6Q1 AP000523.1-201ENST00000398242 1049 ntBASIC18.65■□□□□ 0.58
CAPN6Q9Y6Q1 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.65■□□□□ 0.58
CAPN6Q9Y6Q1 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.65■□□□□ 0.58
CAPN6Q9Y6Q1 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.65■□□□□ 0.58
CAPN6Q9Y6Q1 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.65■□□□□ 0.58
CAPN6Q9Y6Q1 AL391807.1-203ENST00000604392 2365 ntBASIC18.65■□□□□ 0.58
CAPN6Q9Y6Q1 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.65■□□□□ 0.58
CAPN6Q9Y6Q1 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
CAPN6Q9Y6Q1 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.65■□□□□ 0.58
CAPN6Q9Y6Q1 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN6Q9Y6Q1 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN6Q9Y6Q1 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN6Q9Y6Q1 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN6Q9Y6Q1 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CAPN6Q9Y6Q1 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN6Q9Y6Q1 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CAPN6Q9Y6Q1 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
CAPN6Q9Y6Q1 RNF216P1-203ENST00000404404 2427 ntBASIC18.64■□□□□ 0.58
CAPN6Q9Y6Q1 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
CAPN6Q9Y6Q1 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CAPN6Q9Y6Q1 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CAPN6Q9Y6Q1 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CAPN6Q9Y6Q1 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.64■□□□□ 0.57
CAPN6Q9Y6Q1 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CAPN6Q9Y6Q1 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CAPN6Q9Y6Q1 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CAPN6Q9Y6Q1 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.64■□□□□ 0.57
CAPN6Q9Y6Q1 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CAPN6Q9Y6Q1 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.64■□□□□ 0.57
CAPN6Q9Y6Q1 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.64■□□□□ 0.57
CAPN6Q9Y6Q1 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.64■□□□□ 0.57
CAPN6Q9Y6Q1 AL136038.4-201ENST00000603606 1261 ntBASIC18.64■□□□□ 0.57
CAPN6Q9Y6Q1 AL139327.4-201ENST00000612362 153 ntBASIC18.64■□□□□ 0.57
CAPN6Q9Y6Q1 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CAPN6Q9Y6Q1 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CAPN6Q9Y6Q1 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CAPN6Q9Y6Q1 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.64■□□□□ 0.57
CAPN6Q9Y6Q1 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CAPN6Q9Y6Q1 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CAPN6Q9Y6Q1 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
CAPN6Q9Y6Q1 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CAPN6Q9Y6Q1 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CAPN6Q9Y6Q1 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.64■□□□□ 0.57
CAPN6Q9Y6Q1 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.64■□□□□ 0.57
CAPN6Q9Y6Q1 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CAPN6Q9Y6Q1 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CAPN6Q9Y6Q1 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
CAPN6Q9Y6Q1 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.63■□□□□ 0.57
CAPN6Q9Y6Q1 LINC02012-201ENST00000608206 1725 ntBASIC18.63■□□□□ 0.57
CAPN6Q9Y6Q1 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CAPN6Q9Y6Q1 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CAPN6Q9Y6Q1 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CAPN6Q9Y6Q1 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.63■□□□□ 0.57
CAPN6Q9Y6Q1 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CAPN6Q9Y6Q1 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CAPN6Q9Y6Q1 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.63■□□□□ 0.57
CAPN6Q9Y6Q1 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.63■□□□□ 0.57
CAPN6Q9Y6Q1 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.63■□□□□ 0.57
CAPN6Q9Y6Q1 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.63■□□□□ 0.57
CAPN6Q9Y6Q1 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CAPN6Q9Y6Q1 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CAPN6Q9Y6Q1 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CAPN6Q9Y6Q1 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CAPN6Q9Y6Q1 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CAPN6Q9Y6Q1 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CAPN6Q9Y6Q1 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CAPN6Q9Y6Q1 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CAPN6Q9Y6Q1 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CAPN6Q9Y6Q1 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CAPN6Q9Y6Q1 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CAPN6Q9Y6Q1 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.63■□□□□ 0.57
CAPN6Q9Y6Q1 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CAPN6Q9Y6Q1 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CAPN6Q9Y6Q1 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.63■□□□□ 0.57
CAPN6Q9Y6Q1 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.62■□□□□ 0.57
CAPN6Q9Y6Q1 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CAPN6Q9Y6Q1 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CAPN6Q9Y6Q1 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CAPN6Q9Y6Q1 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CAPN6Q9Y6Q1 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CAPN6Q9Y6Q1 MMP23A-201ENST00000234610 1017 ntBASIC18.62■□□□□ 0.57
CAPN6Q9Y6Q1 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.62■□□□□ 0.57
CAPN6Q9Y6Q1 RASA4DP-201ENST00000460726 1199 ntBASIC18.62■□□□□ 0.57
CAPN6Q9Y6Q1 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CAPN6Q9Y6Q1 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.62■□□□□ 0.57
CAPN6Q9Y6Q1 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CAPN6Q9Y6Q1 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CAPN6Q9Y6Q1 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.62■□□□□ 0.57
CAPN6Q9Y6Q1 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CAPN6Q9Y6Q1 AL023973.1-201ENST00000624619 620 ntBASIC18.62■□□□□ 0.57
CAPN6Q9Y6Q1 AC141257.4-201ENST00000634557 245 ntBASIC18.62■□□□□ 0.57
CAPN6Q9Y6Q1 AC136944.6-201ENST00000634818 245 ntBASIC18.62■□□□□ 0.57
CAPN6Q9Y6Q1 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CAPN6Q9Y6Q1 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.62■□□□□ 0.57
CAPN6Q9Y6Q1 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CAPN6Q9Y6Q1 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CAPN6Q9Y6Q1 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.62■□□□□ 0.57
CAPN6Q9Y6Q1 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms