Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.99■□□□□ 0.31
PCDHGA6Q9Y5G7 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.99■□□□□ 0.31
PCDHGA6Q9Y5G7 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA6Q9Y5G7 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA6Q9Y5G7 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA6Q9Y5G7 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
PCDHGA6Q9Y5G7 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA6Q9Y5G7 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA6Q9Y5G7 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA6Q9Y5G7 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
PCDHGA6Q9Y5G7 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
PCDHGA6Q9Y5G7 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA6Q9Y5G7 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PCDHGA6Q9Y5G7 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDHGA6Q9Y5G7 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA6Q9Y5G7 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA6Q9Y5G7 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDHGA6Q9Y5G7 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA6Q9Y5G7 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.98■□□□□ 0.31
PCDHGA6Q9Y5G7 RCN1P2-201ENST00000398357 915 ntBASIC16.98■□□□□ 0.31
PCDHGA6Q9Y5G7 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDHGA6Q9Y5G7 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PCDHGA6Q9Y5G7 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.98■□□□□ 0.31
PCDHGA6Q9Y5G7 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.98■□□□□ 0.31
PCDHGA6Q9Y5G7 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA6Q9Y5G7 AC008608.2-201ENST00000606089 416 ntBASIC16.98■□□□□ 0.31
PCDHGA6Q9Y5G7 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDHGA6Q9Y5G7 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.98■□□□□ 0.31
PCDHGA6Q9Y5G7 AC006538.3-201ENST00000612495 578 ntBASIC16.98■□□□□ 0.31
PCDHGA6Q9Y5G7 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.98■□□□□ 0.31
PCDHGA6Q9Y5G7 AC117500.6-201ENST00000624871 588 ntBASIC16.98■□□□□ 0.31
PCDHGA6Q9Y5G7 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.98■□□□□ 0.31
PCDHGA6Q9Y5G7 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA6Q9Y5G7 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDHGA6Q9Y5G7 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA6Q9Y5G7 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA6Q9Y5G7 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
PCDHGA6Q9Y5G7 PCDHA12-202ENST00000613593 2588 ntBASIC16.98■□□□□ 0.31
PCDHGA6Q9Y5G7 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA6Q9Y5G7 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.98■□□□□ 0.31
PCDHGA6Q9Y5G7 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA6Q9Y5G7 TP73-AS1-210ENST00000637775 1455 ntBASIC16.98■□□□□ 0.31
PCDHGA6Q9Y5G7 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA6Q9Y5G7 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
PCDHGA6Q9Y5G7 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA6Q9Y5G7 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA6Q9Y5G7 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA6Q9Y5G7 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA6Q9Y5G7 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA6Q9Y5G7 IL9RP2-201ENST00000423948 1312 ntBASIC16.97■□□□□ 0.31
PCDHGA6Q9Y5G7 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.97■□□□□ 0.31
PCDHGA6Q9Y5G7 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
PCDHGA6Q9Y5G7 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA6Q9Y5G7 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.97■□□□□ 0.31
PCDHGA6Q9Y5G7 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA6Q9Y5G7 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
PCDHGA6Q9Y5G7 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA6Q9Y5G7 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA6Q9Y5G7 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA6Q9Y5G7 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA6Q9Y5G7 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA6Q9Y5G7 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA6Q9Y5G7 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA6Q9Y5G7 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA6Q9Y5G7 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA6Q9Y5G7 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
PCDHGA6Q9Y5G7 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.97■□□□□ 0.31
PCDHGA6Q9Y5G7 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.97■□□□□ 0.31
PCDHGA6Q9Y5G7 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.97■□□□□ 0.31
PCDHGA6Q9Y5G7 AL031284.1-201ENST00000419297 478 ntBASIC16.97■□□□□ 0.31
PCDHGA6Q9Y5G7 PMS2P1-201ENST00000431037 1228 ntBASIC16.97■□□□□ 0.31
PCDHGA6Q9Y5G7 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA6Q9Y5G7 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.97■□□□□ 0.31
PCDHGA6Q9Y5G7 AL671883.3-201ENST00000603274 991 ntBASIC16.97■□□□□ 0.31
PCDHGA6Q9Y5G7 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.97■□□□□ 0.31
PCDHGA6Q9Y5G7 AL355877.3-201ENST00000622820 899 ntBASIC16.97■□□□□ 0.31
PCDHGA6Q9Y5G7 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.97■□□□□ 0.31
PCDHGA6Q9Y5G7 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA6Q9Y5G7 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA6Q9Y5G7 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA6Q9Y5G7 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA6Q9Y5G7 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PCDHGA6Q9Y5G7 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.97■□□□□ 0.31
PCDHGA6Q9Y5G7 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA6Q9Y5G7 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.97■□□□□ 0.31
PCDHGA6Q9Y5G7 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA6Q9Y5G7 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.97■□□□□ 0.31
PCDHGA6Q9Y5G7 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGA6Q9Y5G7 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGA6Q9Y5G7 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGA6Q9Y5G7 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
PCDHGA6Q9Y5G7 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGA6Q9Y5G7 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGA6Q9Y5G7 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGA6Q9Y5G7 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.96■□□□□ 0.31
PCDHGA6Q9Y5G7 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGA6Q9Y5G7 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGA6Q9Y5G7 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.96■□□□□ 0.31
PCDHGA6Q9Y5G7 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.96■□□□□ 0.31
PCDHGA6Q9Y5G7 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms