Protein–RNA interactions for Protein: Q9Y2E6

DTX4, E3 ubiquitin-protein ligase DTX4, humanhuman

Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX4Q9Y2E6 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
DTX4Q9Y2E6 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
DTX4Q9Y2E6 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
DTX4Q9Y2E6 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DTX4Q9Y2E6 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DTX4Q9Y2E6 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
DTX4Q9Y2E6 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DTX4Q9Y2E6 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.31■□□□□ 0.2
DTX4Q9Y2E6 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.31■□□□□ 0.2
DTX4Q9Y2E6 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DTX4Q9Y2E6 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
DTX4Q9Y2E6 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DTX4Q9Y2E6 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.31■□□□□ 0.2
DTX4Q9Y2E6 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
DTX4Q9Y2E6 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DTX4Q9Y2E6 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DTX4Q9Y2E6 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
DTX4Q9Y2E6 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
DTX4Q9Y2E6 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DTX4Q9Y2E6 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DTX4Q9Y2E6 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.31■□□□□ 0.2
DTX4Q9Y2E6 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DTX4Q9Y2E6 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
DTX4Q9Y2E6 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
DTX4Q9Y2E6 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.31■□□□□ 0.2
DTX4Q9Y2E6 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DTX4Q9Y2E6 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
DTX4Q9Y2E6 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.31■□□□□ 0.2
DTX4Q9Y2E6 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.31■□□□□ 0.2
DTX4Q9Y2E6 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.31■□□□□ 0.2
DTX4Q9Y2E6 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.31■□□□□ 0.2
DTX4Q9Y2E6 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.31■□□□□ 0.2
DTX4Q9Y2E6 AC002558.1-201ENST00000488906 803 ntBASIC16.31■□□□□ 0.2
DTX4Q9Y2E6 UNC93B7-201ENST00000509439 705 ntBASIC16.31■□□□□ 0.2
DTX4Q9Y2E6 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
DTX4Q9Y2E6 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.31■□□□□ 0.2
DTX4Q9Y2E6 AL121772.3-201ENST00000610840 674 ntBASIC16.31■□□□□ 0.2
DTX4Q9Y2E6 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DTX4Q9Y2E6 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
DTX4Q9Y2E6 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
DTX4Q9Y2E6 LYSMD4-203ENST00000378904 2122 ntBASIC16.31■□□□□ 0.2
DTX4Q9Y2E6 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DTX4Q9Y2E6 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
DTX4Q9Y2E6 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DTX4Q9Y2E6 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.31■□□□□ 0.2
DTX4Q9Y2E6 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DTX4Q9Y2E6 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.31■□□□□ 0.2
DTX4Q9Y2E6 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DTX4Q9Y2E6 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DTX4Q9Y2E6 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DTX4Q9Y2E6 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.3■□□□□ 0.2
DTX4Q9Y2E6 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DTX4Q9Y2E6 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
DTX4Q9Y2E6 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
DTX4Q9Y2E6 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.3■□□□□ 0.2
DTX4Q9Y2E6 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.3■□□□□ 0.2
DTX4Q9Y2E6 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.3■□□□□ 0.2
DTX4Q9Y2E6 AL353593.2-201ENST00000602529 1483 ntBASIC16.3■□□□□ 0.2
DTX4Q9Y2E6 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.3■□□□□ 0.2
DTX4Q9Y2E6 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.3■□□□□ 0.2
DTX4Q9Y2E6 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DTX4Q9Y2E6 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DTX4Q9Y2E6 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
DTX4Q9Y2E6 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
DTX4Q9Y2E6 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DTX4Q9Y2E6 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DTX4Q9Y2E6 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
DTX4Q9Y2E6 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.3■□□□□ 0.2
DTX4Q9Y2E6 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DTX4Q9Y2E6 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DTX4Q9Y2E6 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.3■□□□□ 0.2
DTX4Q9Y2E6 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DTX4Q9Y2E6 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DTX4Q9Y2E6 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DTX4Q9Y2E6 AC103564.2-201ENST00000432853 1299 ntBASIC16.3■□□□□ 0.2
DTX4Q9Y2E6 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.3■□□□□ 0.2
DTX4Q9Y2E6 AC132008.2-207ENST00000454517 770 ntBASIC16.3■□□□□ 0.2
DTX4Q9Y2E6 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.3■□□□□ 0.2
DTX4Q9Y2E6 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.3■□□□□ 0.2
DTX4Q9Y2E6 AC091304.2-201ENST00000564639 760 ntBASIC16.3■□□□□ 0.2
DTX4Q9Y2E6 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.3■□□□□ 0.2
DTX4Q9Y2E6 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DTX4Q9Y2E6 AP001269.4-201ENST00000609611 512 ntBASIC16.3■□□□□ 0.2
DTX4Q9Y2E6 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.3■□□□□ 0.2
DTX4Q9Y2E6 AD001527.2-201ENST00000622994 785 ntBASIC16.3■□□□□ 0.2
DTX4Q9Y2E6 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DTX4Q9Y2E6 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
DTX4Q9Y2E6 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.3■□□□□ 0.2
DTX4Q9Y2E6 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
DTX4Q9Y2E6 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DTX4Q9Y2E6 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.3■□□□□ 0.2
DTX4Q9Y2E6 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.3■□□□□ 0.2
DTX4Q9Y2E6 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DTX4Q9Y2E6 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DTX4Q9Y2E6 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
DTX4Q9Y2E6 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DTX4Q9Y2E6 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DTX4Q9Y2E6 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
DTX4Q9Y2E6 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DTX4Q9Y2E6 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms