Protein–RNA interactions for Protein: Q9Y223

GNE, Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase, humanhuman

Known RBP Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GNEQ9Y223 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GNEQ9Y223 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GNEQ9Y223 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.51■□□□□ 0.71
GNEQ9Y223 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
GNEQ9Y223 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GNEQ9Y223 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
GNEQ9Y223 AL590787.1-201ENST00000568856 1315 ntBASIC19.51■□□□□ 0.71
GNEQ9Y223 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
GNEQ9Y223 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
GNEQ9Y223 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
GNEQ9Y223 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
GNEQ9Y223 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.5■□□□□ 0.71
GNEQ9Y223 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
GNEQ9Y223 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.5■□□□□ 0.71
GNEQ9Y223 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.5■□□□□ 0.71
GNEQ9Y223 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
GNEQ9Y223 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
GNEQ9Y223 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.5■□□□□ 0.71
GNEQ9Y223 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC19.5■□□□□ 0.71
GNEQ9Y223 METTL23-205ENST00000588302 925 ntTSL 5 BASIC19.5■□□□□ 0.71
GNEQ9Y223 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC19.5■□□□□ 0.71
GNEQ9Y223 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
GNEQ9Y223 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
GNEQ9Y223 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
GNEQ9Y223 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
GNEQ9Y223 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
GNEQ9Y223 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
GNEQ9Y223 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
GNEQ9Y223 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
GNEQ9Y223 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
GNEQ9Y223 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
GNEQ9Y223 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.49■□□□□ 0.71
GNEQ9Y223 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
GNEQ9Y223 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
GNEQ9Y223 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
GNEQ9Y223 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
GNEQ9Y223 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
GNEQ9Y223 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.49■□□□□ 0.71
GNEQ9Y223 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
GNEQ9Y223 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
GNEQ9Y223 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
GNEQ9Y223 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
GNEQ9Y223 AL645939.2-201ENST00000427340 991 ntBASIC19.49■□□□□ 0.71
GNEQ9Y223 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.49■□□□□ 0.71
GNEQ9Y223 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
GNEQ9Y223 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
GNEQ9Y223 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC19.49■□□□□ 0.71
GNEQ9Y223 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
GNEQ9Y223 AC023141.13-201ENST00000604991 943 ntBASIC19.49■□□□□ 0.71
GNEQ9Y223 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.49■□□□□ 0.71
GNEQ9Y223 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.49■□□□□ 0.71
GNEQ9Y223 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.49■□□□□ 0.71
GNEQ9Y223 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
GNEQ9Y223 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
GNEQ9Y223 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
GNEQ9Y223 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
GNEQ9Y223 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
GNEQ9Y223 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
GNEQ9Y223 PI4KAP1-204ENST00000612579 1703 ntBASIC19.48■□□□□ 0.71
GNEQ9Y223 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.48■□□□□ 0.71
GNEQ9Y223 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
GNEQ9Y223 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
GNEQ9Y223 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
GNEQ9Y223 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.48■□□□□ 0.71
GNEQ9Y223 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.48■□□□□ 0.71
GNEQ9Y223 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
GNEQ9Y223 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
GNEQ9Y223 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19.48■□□□□ 0.71
GNEQ9Y223 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.48■□□□□ 0.71
GNEQ9Y223 FAM58CP-201ENST00000435741 640 ntBASIC19.48■□□□□ 0.71
GNEQ9Y223 ACTG1P14-201ENST00000446382 1122 ntBASIC19.48■□□□□ 0.71
GNEQ9Y223 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC19.48■□□□□ 0.71
GNEQ9Y223 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.48■□□□□ 0.71
GNEQ9Y223 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.48■□□□□ 0.71
GNEQ9Y223 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
GNEQ9Y223 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.48■□□□□ 0.71
GNEQ9Y223 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.48■□□□□ 0.71
GNEQ9Y223 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.48■□□□□ 0.71
GNEQ9Y223 AC007064.4-201ENST00000637740 555 ntBASIC19.48■□□□□ 0.71
GNEQ9Y223 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.48■□□□□ 0.71
GNEQ9Y223 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
GNEQ9Y223 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.48■□□□□ 0.71
GNEQ9Y223 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
GNEQ9Y223 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
GNEQ9Y223 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.48■□□□□ 0.71
GNEQ9Y223 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
GNEQ9Y223 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.48■□□□□ 0.71
GNEQ9Y223 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GNEQ9Y223 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
GNEQ9Y223 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
GNEQ9Y223 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.47■□□□□ 0.71
GNEQ9Y223 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.47■□□□□ 0.71
GNEQ9Y223 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
GNEQ9Y223 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GNEQ9Y223 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
GNEQ9Y223 KRT18P55-202ENST00000578578 1546 ntBASIC19.47■□□□□ 0.71
GNEQ9Y223 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
GNEQ9Y223 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
GNEQ9Y223 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GNEQ9Y223 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms