Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NOTCH3Q9UM47 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NOTCH3Q9UM47 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NOTCH3Q9UM47 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
NOTCH3Q9UM47 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC13.62□□□□□ -0.23
NOTCH3Q9UM47 DHDH-204ENST00000523250 634 ntTSL 5 BASIC13.62□□□□□ -0.23
NOTCH3Q9UM47 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NOTCH3Q9UM47 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NOTCH3Q9UM47 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC13.62□□□□□ -0.23
NOTCH3Q9UM47 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
NOTCH3Q9UM47 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NOTCH3Q9UM47 AC125634.1-201ENST00000438758 1403 ntBASIC13.62□□□□□ -0.23
NOTCH3Q9UM47 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NOTCH3Q9UM47 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
NOTCH3Q9UM47 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
NOTCH3Q9UM47 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NOTCH3Q9UM47 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NOTCH3Q9UM47 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NOTCH3Q9UM47 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NOTCH3Q9UM47 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC13.62□□□□□ -0.23
NOTCH3Q9UM47 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.62□□□□□ -0.23
NOTCH3Q9UM47 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NOTCH3Q9UM47 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NOTCH3Q9UM47 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
NOTCH3Q9UM47 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
NOTCH3Q9UM47 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
NOTCH3Q9UM47 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NOTCH3Q9UM47 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NOTCH3Q9UM47 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
NOTCH3Q9UM47 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC13.62□□□□□ -0.23
NOTCH3Q9UM47 AC002347.1-201ENST00000569543 541 ntBASIC13.62□□□□□ -0.23
NOTCH3Q9UM47 PNMT-203ENST00000581428 677 ntTSL 2 BASIC13.62□□□□□ -0.23
NOTCH3Q9UM47 RPS15-207ENST00000591032 550 ntTSL 3 BASIC13.62□□□□□ -0.23
NOTCH3Q9UM47 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC13.62□□□□□ -0.23
NOTCH3Q9UM47 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
NOTCH3Q9UM47 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NOTCH3Q9UM47 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
NOTCH3Q9UM47 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
NOTCH3Q9UM47 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC13.61□□□□□ -0.23
NOTCH3Q9UM47 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NOTCH3Q9UM47 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC13.61□□□□□ -0.23
NOTCH3Q9UM47 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
NOTCH3Q9UM47 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NOTCH3Q9UM47 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
NOTCH3Q9UM47 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NOTCH3Q9UM47 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NOTCH3Q9UM47 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NOTCH3Q9UM47 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NOTCH3Q9UM47 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
NOTCH3Q9UM47 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
NOTCH3Q9UM47 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NOTCH3Q9UM47 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NOTCH3Q9UM47 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
NOTCH3Q9UM47 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
NOTCH3Q9UM47 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NOTCH3Q9UM47 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NOTCH3Q9UM47 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC13.61□□□□□ -0.23
NOTCH3Q9UM47 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC13.61□□□□□ -0.23
NOTCH3Q9UM47 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC13.61□□□□□ -0.23
NOTCH3Q9UM47 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC13.61□□□□□ -0.23
NOTCH3Q9UM47 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NOTCH3Q9UM47 FAM197Y3-203ENST00000618346 717 ntBASIC13.61□□□□□ -0.23
NOTCH3Q9UM47 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NOTCH3Q9UM47 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
NOTCH3Q9UM47 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NOTCH3Q9UM47 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NOTCH3Q9UM47 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NOTCH3Q9UM47 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
NOTCH3Q9UM47 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
NOTCH3Q9UM47 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC13.61□□□□□ -0.23
NOTCH3Q9UM47 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
NOTCH3Q9UM47 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
NOTCH3Q9UM47 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
NOTCH3Q9UM47 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NOTCH3Q9UM47 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NOTCH3Q9UM47 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NOTCH3Q9UM47 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC13.61□□□□□ -0.23
NOTCH3Q9UM47 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC13.61□□□□□ -0.23
NOTCH3Q9UM47 OR7E14P-202ENST00000530490 1290 ntBASIC13.61□□□□□ -0.23
NOTCH3Q9UM47 AC105339.3-201ENST00000560043 636 ntBASIC13.61□□□□□ -0.23
NOTCH3Q9UM47 AC025062.2-201ENST00000605477 670 ntBASIC13.61□□□□□ -0.23
NOTCH3Q9UM47 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC13.61□□□□□ -0.23
NOTCH3Q9UM47 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC13.61□□□□□ -0.23
NOTCH3Q9UM47 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
NOTCH3Q9UM47 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
NOTCH3Q9UM47 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NOTCH3Q9UM47 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NOTCH3Q9UM47 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC13.6□□□□□ -0.23
NOTCH3Q9UM47 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
NOTCH3Q9UM47 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NOTCH3Q9UM47 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
NOTCH3Q9UM47 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
NOTCH3Q9UM47 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
NOTCH3Q9UM47 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC13.6□□□□□ -0.23
NOTCH3Q9UM47 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NOTCH3Q9UM47 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NOTCH3Q9UM47 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NOTCH3Q9UM47 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NOTCH3Q9UM47 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC13.6□□□□□ -0.23
NOTCH3Q9UM47 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms