Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
VTI1BQ9UEU0 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
VTI1BQ9UEU0 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
VTI1BQ9UEU0 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
VTI1BQ9UEU0 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.35■□□□□ 0.37
VTI1BQ9UEU0 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
VTI1BQ9UEU0 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
VTI1BQ9UEU0 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VTI1BQ9UEU0 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
VTI1BQ9UEU0 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
VTI1BQ9UEU0 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VTI1BQ9UEU0 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VTI1BQ9UEU0 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VTI1BQ9UEU0 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
VTI1BQ9UEU0 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VTI1BQ9UEU0 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.35■□□□□ 0.37
VTI1BQ9UEU0 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VTI1BQ9UEU0 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VTI1BQ9UEU0 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VTI1BQ9UEU0 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
VTI1BQ9UEU0 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VTI1BQ9UEU0 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VTI1BQ9UEU0 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VTI1BQ9UEU0 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VTI1BQ9UEU0 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VTI1BQ9UEU0 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
VTI1BQ9UEU0 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
VTI1BQ9UEU0 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
VTI1BQ9UEU0 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VTI1BQ9UEU0 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VTI1BQ9UEU0 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
VTI1BQ9UEU0 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.34■□□□□ 0.37
VTI1BQ9UEU0 TNRC18P3-201ENST00000441896 2691 ntBASIC17.34■□□□□ 0.37
VTI1BQ9UEU0 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.34■□□□□ 0.37
VTI1BQ9UEU0 HOMER2P1-201ENST00000455653 964 ntBASIC17.34■□□□□ 0.37
VTI1BQ9UEU0 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.34■□□□□ 0.37
VTI1BQ9UEU0 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.34■□□□□ 0.37
VTI1BQ9UEU0 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.34■□□□□ 0.37
VTI1BQ9UEU0 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VTI1BQ9UEU0 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.34■□□□□ 0.37
VTI1BQ9UEU0 AL049597.2-201ENST00000565575 961 ntBASIC17.34■□□□□ 0.37
VTI1BQ9UEU0 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.34■□□□□ 0.37
VTI1BQ9UEU0 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VTI1BQ9UEU0 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.34■□□□□ 0.37
VTI1BQ9UEU0 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VTI1BQ9UEU0 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
VTI1BQ9UEU0 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VTI1BQ9UEU0 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
VTI1BQ9UEU0 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VTI1BQ9UEU0 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
VTI1BQ9UEU0 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
VTI1BQ9UEU0 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
VTI1BQ9UEU0 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
VTI1BQ9UEU0 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VTI1BQ9UEU0 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VTI1BQ9UEU0 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VTI1BQ9UEU0 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
VTI1BQ9UEU0 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
VTI1BQ9UEU0 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.33■□□□□ 0.36
VTI1BQ9UEU0 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.33■□□□□ 0.36
VTI1BQ9UEU0 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
VTI1BQ9UEU0 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VTI1BQ9UEU0 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
VTI1BQ9UEU0 FAM8A6P-201ENST00000407496 1135 ntBASIC17.33■□□□□ 0.36
VTI1BQ9UEU0 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.33■□□□□ 0.36
VTI1BQ9UEU0 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
VTI1BQ9UEU0 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.33■□□□□ 0.36
VTI1BQ9UEU0 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.36
VTI1BQ9UEU0 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
VTI1BQ9UEU0 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
VTI1BQ9UEU0 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
VTI1BQ9UEU0 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VTI1BQ9UEU0 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
VTI1BQ9UEU0 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VTI1BQ9UEU0 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
VTI1BQ9UEU0 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
VTI1BQ9UEU0 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
VTI1BQ9UEU0 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
VTI1BQ9UEU0 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VTI1BQ9UEU0 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VTI1BQ9UEU0 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VTI1BQ9UEU0 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VTI1BQ9UEU0 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.32■□□□□ 0.36
VTI1BQ9UEU0 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
VTI1BQ9UEU0 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
VTI1BQ9UEU0 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VTI1BQ9UEU0 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
VTI1BQ9UEU0 STARP1-201ENST00000397973 869 ntBASIC17.32■□□□□ 0.36
VTI1BQ9UEU0 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.32■□□□□ 0.36
VTI1BQ9UEU0 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VTI1BQ9UEU0 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VTI1BQ9UEU0 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VTI1BQ9UEU0 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VTI1BQ9UEU0 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VTI1BQ9UEU0 AC034232.1-201ENST00000506026 1064 ntBASIC17.32■□□□□ 0.36
VTI1BQ9UEU0 AC113404.2-201ENST00000507884 177 ntBASIC17.32■□□□□ 0.36
VTI1BQ9UEU0 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
VTI1BQ9UEU0 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VTI1BQ9UEU0 LINC01238-205ENST00000567549 1107 ntBASIC17.32■□□□□ 0.36
VTI1BQ9UEU0 MIR3917-201ENST00000580971 93 ntBASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms