Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
COMMD3Q9UBI1 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
COMMD3Q9UBI1 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
COMMD3Q9UBI1 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.53■□□□□ 0.08
COMMD3Q9UBI1 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
COMMD3Q9UBI1 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
COMMD3Q9UBI1 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.53■□□□□ 0.08
COMMD3Q9UBI1 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
COMMD3Q9UBI1 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
COMMD3Q9UBI1 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC15.53■□□□□ 0.08
COMMD3Q9UBI1 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
COMMD3Q9UBI1 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC15.53■□□□□ 0.08
COMMD3Q9UBI1 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC15.53■□□□□ 0.08
COMMD3Q9UBI1 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC15.53■□□□□ 0.08
COMMD3Q9UBI1 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
COMMD3Q9UBI1 AC083880.1-201ENST00000608266 535 ntBASIC15.53■□□□□ 0.08
COMMD3Q9UBI1 AC011298.2-201ENST00000617989 482 ntBASIC15.53■□□□□ 0.08
COMMD3Q9UBI1 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
COMMD3Q9UBI1 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.53■□□□□ 0.08
COMMD3Q9UBI1 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
COMMD3Q9UBI1 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
COMMD3Q9UBI1 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
COMMD3Q9UBI1 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
COMMD3Q9UBI1 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
COMMD3Q9UBI1 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
COMMD3Q9UBI1 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
COMMD3Q9UBI1 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.53■□□□□ 0.08
COMMD3Q9UBI1 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
COMMD3Q9UBI1 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
COMMD3Q9UBI1 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
COMMD3Q9UBI1 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
COMMD3Q9UBI1 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
COMMD3Q9UBI1 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.53■□□□□ 0.08
COMMD3Q9UBI1 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
COMMD3Q9UBI1 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
COMMD3Q9UBI1 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
COMMD3Q9UBI1 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.52■□□□□ 0.08
COMMD3Q9UBI1 AL024508.2-201ENST00000607749 1894 ntBASIC15.52■□□□□ 0.08
COMMD3Q9UBI1 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
COMMD3Q9UBI1 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
COMMD3Q9UBI1 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
COMMD3Q9UBI1 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
COMMD3Q9UBI1 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
COMMD3Q9UBI1 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.08
COMMD3Q9UBI1 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.52■□□□□ 0.08
COMMD3Q9UBI1 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.52■□□□□ 0.08
COMMD3Q9UBI1 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
COMMD3Q9UBI1 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
COMMD3Q9UBI1 AC022898.2-201ENST00000616822 1312 ntBASIC15.52■□□□□ 0.08
COMMD3Q9UBI1 AC132938.6-201ENST00000623828 1655 ntBASIC15.52■□□□□ 0.08
COMMD3Q9UBI1 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
COMMD3Q9UBI1 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.52■□□□□ 0.08
COMMD3Q9UBI1 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
COMMD3Q9UBI1 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
COMMD3Q9UBI1 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
COMMD3Q9UBI1 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC15.52■□□□□ 0.08
COMMD3Q9UBI1 KRT16P5-201ENST00000455284 522 ntBASIC15.52■□□□□ 0.08
COMMD3Q9UBI1 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC15.52■□□□□ 0.08
COMMD3Q9UBI1 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
COMMD3Q9UBI1 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC15.52■□□□□ 0.08
COMMD3Q9UBI1 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
COMMD3Q9UBI1 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC15.52■□□□□ 0.08
COMMD3Q9UBI1 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
COMMD3Q9UBI1 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC15.52■□□□□ 0.08
COMMD3Q9UBI1 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.52■□□□□ 0.07
COMMD3Q9UBI1 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.07
COMMD3Q9UBI1 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
COMMD3Q9UBI1 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.52■□□□□ 0.07
COMMD3Q9UBI1 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
COMMD3Q9UBI1 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.52■□□□□ 0.07
COMMD3Q9UBI1 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.52■□□□□ 0.07
COMMD3Q9UBI1 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
COMMD3Q9UBI1 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
COMMD3Q9UBI1 AL513477.1-201ENST00000602865 2407 ntBASIC15.52■□□□□ 0.07
COMMD3Q9UBI1 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
COMMD3Q9UBI1 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
COMMD3Q9UBI1 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD3Q9UBI1 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD3Q9UBI1 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
COMMD3Q9UBI1 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.51■□□□□ 0.07
COMMD3Q9UBI1 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
COMMD3Q9UBI1 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD3Q9UBI1 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD3Q9UBI1 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD3Q9UBI1 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD3Q9UBI1 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
COMMD3Q9UBI1 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD3Q9UBI1 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD3Q9UBI1 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.51■□□□□ 0.07
COMMD3Q9UBI1 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD3Q9UBI1 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD3Q9UBI1 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD3Q9UBI1 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
COMMD3Q9UBI1 BUB3-202ENST00000368859 667 ntTSL 3 BASIC15.51■□□□□ 0.07
COMMD3Q9UBI1 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC15.51■□□□□ 0.07
COMMD3Q9UBI1 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD3Q9UBI1 CROCCP5-201ENST00000436658 830 ntBASIC15.51■□□□□ 0.07
COMMD3Q9UBI1 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC15.51■□□□□ 0.07
COMMD3Q9UBI1 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC15.51■□□□□ 0.07
COMMD3Q9UBI1 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms