Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC11.52□□□□□ -0.56
LINC00474Q9P2X8 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
LINC00474Q9P2X8 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC11.52□□□□□ -0.56
LINC00474Q9P2X8 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
LINC00474Q9P2X8 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00474Q9P2X8 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC11.52□□□□□ -0.57
LINC00474Q9P2X8 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC11.52□□□□□ -0.57
LINC00474Q9P2X8 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC11.52□□□□□ -0.57
LINC00474Q9P2X8 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00474Q9P2X8 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00474Q9P2X8 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC11.52□□□□□ -0.57
LINC00474Q9P2X8 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
LINC00474Q9P2X8 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00474Q9P2X8 LINC00602-201ENST00000629776 2065 ntBASIC11.52□□□□□ -0.57
LINC00474Q9P2X8 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC11.52□□□□□ -0.57
LINC00474Q9P2X8 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC11.52□□□□□ -0.57
LINC00474Q9P2X8 TSPY22P-201ENST00000427496 604 ntBASIC11.52□□□□□ -0.57
LINC00474Q9P2X8 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00474Q9P2X8 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00474Q9P2X8 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC11.52□□□□□ -0.57
LINC00474Q9P2X8 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC11.52□□□□□ -0.57
LINC00474Q9P2X8 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC11.52□□□□□ -0.57
LINC00474Q9P2X8 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC11.52□□□□□ -0.57
LINC00474Q9P2X8 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC11.52□□□□□ -0.57
LINC00474Q9P2X8 AP000550.4-202ENST00000639755 178 ntBASIC11.52□□□□□ -0.57
LINC00474Q9P2X8 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC11.52□□□□□ -0.57
LINC00474Q9P2X8 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00474Q9P2X8 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC11.52□□□□□ -0.57
LINC00474Q9P2X8 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
LINC00474Q9P2X8 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00474Q9P2X8 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00474Q9P2X8 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00474Q9P2X8 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00474Q9P2X8 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00474Q9P2X8 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00474Q9P2X8 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC11.52□□□□□ -0.57
LINC00474Q9P2X8 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00474Q9P2X8 IER3-202ENST00000376377 1350 ntBASIC11.52□□□□□ -0.57
LINC00474Q9P2X8 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00474Q9P2X8 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00474Q9P2X8 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00474Q9P2X8 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00474Q9P2X8 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
LINC00474Q9P2X8 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
LINC00474Q9P2X8 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC11.52□□□□□ -0.57
LINC00474Q9P2X8 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00474Q9P2X8 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC11.52□□□□□ -0.57
LINC00474Q9P2X8 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00474Q9P2X8 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC11.51□□□□□ -0.57
LINC00474Q9P2X8 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00474Q9P2X8 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00474Q9P2X8 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
LINC00474Q9P2X8 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00474Q9P2X8 AC138028.4-201ENST00000564984 1845 ntBASIC11.51□□□□□ -0.57
LINC00474Q9P2X8 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC11.51□□□□□ -0.57
LINC00474Q9P2X8 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
LINC00474Q9P2X8 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC11.51□□□□□ -0.57
LINC00474Q9P2X8 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00474Q9P2X8 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC11.51□□□□□ -0.57
LINC00474Q9P2X8 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00474Q9P2X8 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC11.51□□□□□ -0.57
LINC00474Q9P2X8 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00474Q9P2X8 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00474Q9P2X8 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00474Q9P2X8 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00474Q9P2X8 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC11.51□□□□□ -0.57
LINC00474Q9P2X8 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00474Q9P2X8 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC11.51□□□□□ -0.57
LINC00474Q9P2X8 RNF146-204ENST00000476956 884 ntTSL 2 BASIC11.51□□□□□ -0.57
LINC00474Q9P2X8 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC11.51□□□□□ -0.57
LINC00474Q9P2X8 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC11.51□□□□□ -0.57
LINC00474Q9P2X8 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00474Q9P2X8 AL390719.2-201ENST00000606993 987 ntBASIC11.51□□□□□ -0.57
LINC00474Q9P2X8 WDR6-223ENST00000627177 207 ntTSL 2 BASIC11.51□□□□□ -0.57
LINC00474Q9P2X8 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00474Q9P2X8 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC11.51□□□□□ -0.57
LINC00474Q9P2X8 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00474Q9P2X8 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00474Q9P2X8 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00474Q9P2X8 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00474Q9P2X8 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00474Q9P2X8 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00474Q9P2X8 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00474Q9P2X8 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC11.51□□□□□ -0.57
LINC00474Q9P2X8 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00474Q9P2X8 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00474Q9P2X8 PCDHA12-202ENST00000613593 2588 ntBASIC11.51□□□□□ -0.57
LINC00474Q9P2X8 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00474Q9P2X8 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
LINC00474Q9P2X8 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00474Q9P2X8 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00474Q9P2X8 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
LINC00474Q9P2X8 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00474Q9P2X8 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC11.51□□□□□ -0.57
LINC00474Q9P2X8 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00474Q9P2X8 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00474Q9P2X8 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC11.51□□□□□ -0.57
LINC00474Q9P2X8 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00474Q9P2X8 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00474Q9P2X8 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms