Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.38■□□□□ 0.37
MKS1Q9NXB0 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.38■□□□□ 0.37
MKS1Q9NXB0 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.38■□□□□ 0.37
MKS1Q9NXB0 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MKS1Q9NXB0 AC092053.1-201ENST00000605787 1936 ntBASIC17.38■□□□□ 0.37
MKS1Q9NXB0 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MKS1Q9NXB0 AC078925.2-201ENST00000624013 1973 ntBASIC17.38■□□□□ 0.37
MKS1Q9NXB0 KRT17P2-201ENST00000300992 1314 ntBASIC17.38■□□□□ 0.37
MKS1Q9NXB0 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MKS1Q9NXB0 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MKS1Q9NXB0 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
MKS1Q9NXB0 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MKS1Q9NXB0 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
MKS1Q9NXB0 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MKS1Q9NXB0 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MKS1Q9NXB0 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MKS1Q9NXB0 DOC2GP-204ENST00000639052 2548 ntBASIC17.38■□□□□ 0.37
MKS1Q9NXB0 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.38■□□□□ 0.37
MKS1Q9NXB0 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.38■□□□□ 0.37
MKS1Q9NXB0 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
MKS1Q9NXB0 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MKS1Q9NXB0 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.37■□□□□ 0.37
MKS1Q9NXB0 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MKS1Q9NXB0 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MKS1Q9NXB0 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MKS1Q9NXB0 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.37■□□□□ 0.37
MKS1Q9NXB0 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
MKS1Q9NXB0 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
MKS1Q9NXB0 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
MKS1Q9NXB0 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
MKS1Q9NXB0 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
MKS1Q9NXB0 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MKS1Q9NXB0 HLA-F-220ENST00000434407 884 ntBASIC17.37■□□□□ 0.37
MKS1Q9NXB0 KRT18P48-201ENST00000434763 852 ntBASIC17.37■□□□□ 0.37
MKS1Q9NXB0 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.37■□□□□ 0.37
MKS1Q9NXB0 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.37■□□□□ 0.37
MKS1Q9NXB0 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.37■□□□□ 0.37
MKS1Q9NXB0 RASA4DP-201ENST00000460726 1199 ntBASIC17.37■□□□□ 0.37
MKS1Q9NXB0 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.37■□□□□ 0.37
MKS1Q9NXB0 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.37■□□□□ 0.37
MKS1Q9NXB0 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.37■□□□□ 0.37
MKS1Q9NXB0 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MKS1Q9NXB0 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MKS1Q9NXB0 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MKS1Q9NXB0 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MKS1Q9NXB0 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
MKS1Q9NXB0 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.37■□□□□ 0.37
MKS1Q9NXB0 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.37■□□□□ 0.37
MKS1Q9NXB0 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.37■□□□□ 0.37
MKS1Q9NXB0 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.37■□□□□ 0.37
MKS1Q9NXB0 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MKS1Q9NXB0 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MKS1Q9NXB0 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.37■□□□□ 0.37
MKS1Q9NXB0 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.37■□□□□ 0.37
MKS1Q9NXB0 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MKS1Q9NXB0 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MKS1Q9NXB0 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
MKS1Q9NXB0 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MKS1Q9NXB0 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MKS1Q9NXB0 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MKS1Q9NXB0 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.36■□□□□ 0.37
MKS1Q9NXB0 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.36■□□□□ 0.37
MKS1Q9NXB0 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MKS1Q9NXB0 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MKS1Q9NXB0 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
MKS1Q9NXB0 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.36■□□□□ 0.37
MKS1Q9NXB0 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MKS1Q9NXB0 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MKS1Q9NXB0 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MKS1Q9NXB0 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.36■□□□□ 0.37
MKS1Q9NXB0 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MKS1Q9NXB0 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MKS1Q9NXB0 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MKS1Q9NXB0 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
MKS1Q9NXB0 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
MKS1Q9NXB0 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MKS1Q9NXB0 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
MKS1Q9NXB0 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MKS1Q9NXB0 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MKS1Q9NXB0 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MKS1Q9NXB0 MYCLP1-201ENST00000372451 1075 ntBASIC17.36■□□□□ 0.37
MKS1Q9NXB0 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MKS1Q9NXB0 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MKS1Q9NXB0 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MKS1Q9NXB0 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
MKS1Q9NXB0 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
MKS1Q9NXB0 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MKS1Q9NXB0 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MKS1Q9NXB0 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.36■□□□□ 0.37
MKS1Q9NXB0 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.36■□□□□ 0.37
MKS1Q9NXB0 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
MKS1Q9NXB0 AC097374.2-201ENST00000618617 1306 ntBASIC17.36■□□□□ 0.37
MKS1Q9NXB0 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MKS1Q9NXB0 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.36■□□□□ 0.37
MKS1Q9NXB0 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MKS1Q9NXB0 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MKS1Q9NXB0 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.36■□□□□ 0.37
MKS1Q9NXB0 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
MKS1Q9NXB0 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.36■□□□□ 0.37
MKS1Q9NXB0 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms