Protein–RNA interactions for Protein: Q9NUV7

SPTLC3, Serine palmitoyltransferase 3, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3Q9NUV7 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPTLC3Q9NUV7 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SPTLC3Q9NUV7 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SPTLC3Q9NUV7 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
SPTLC3Q9NUV7 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.4■□□□□ 0.7
SPTLC3Q9NUV7 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.4■□□□□ 0.7
SPTLC3Q9NUV7 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SPTLC3Q9NUV7 RBM17P1-201ENST00000453646 1190 ntBASIC19.4■□□□□ 0.7
SPTLC3Q9NUV7 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SPTLC3Q9NUV7 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.4■□□□□ 0.7
SPTLC3Q9NUV7 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.4■□□□□ 0.7
SPTLC3Q9NUV7 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.4■□□□□ 0.7
SPTLC3Q9NUV7 Z99916.2-201ENST00000604037 246 ntBASIC19.4■□□□□ 0.7
SPTLC3Q9NUV7 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SPTLC3Q9NUV7 LYSMD4-203ENST00000378904 2122 ntBASIC19.4■□□□□ 0.7
SPTLC3Q9NUV7 AC092338.2-201ENST00000568827 1415 ntBASIC19.4■□□□□ 0.7
SPTLC3Q9NUV7 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SPTLC3Q9NUV7 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPTLC3Q9NUV7 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.4■□□□□ 0.7
SPTLC3Q9NUV7 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.4■□□□□ 0.7
SPTLC3Q9NUV7 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SPTLC3Q9NUV7 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SPTLC3Q9NUV7 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SPTLC3Q9NUV7 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
SPTLC3Q9NUV7 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC19.39■□□□□ 0.7
SPTLC3Q9NUV7 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SPTLC3Q9NUV7 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SPTLC3Q9NUV7 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
SPTLC3Q9NUV7 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
SPTLC3Q9NUV7 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SPTLC3Q9NUV7 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SPTLC3Q9NUV7 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC19.39■□□□□ 0.69
SPTLC3Q9NUV7 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SPTLC3Q9NUV7 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SPTLC3Q9NUV7 AC005052.1-201ENST00000625181 2492 ntBASIC19.39■□□□□ 0.69
SPTLC3Q9NUV7 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SPTLC3Q9NUV7 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.39■□□□□ 0.69
SPTLC3Q9NUV7 AL390955.1-201ENST00000428694 934 ntBASIC19.39■□□□□ 0.69
SPTLC3Q9NUV7 TSPY17P-201ENST00000450329 467 ntBASIC19.39■□□□□ 0.69
SPTLC3Q9NUV7 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.39■□□□□ 0.69
SPTLC3Q9NUV7 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SPTLC3Q9NUV7 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.39■□□□□ 0.69
SPTLC3Q9NUV7 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.39■□□□□ 0.69
SPTLC3Q9NUV7 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SPTLC3Q9NUV7 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SPTLC3Q9NUV7 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
SPTLC3Q9NUV7 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SPTLC3Q9NUV7 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SPTLC3Q9NUV7 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SPTLC3Q9NUV7 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SPTLC3Q9NUV7 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SPTLC3Q9NUV7 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
SPTLC3Q9NUV7 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
SPTLC3Q9NUV7 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC19.39■□□□□ 0.69
SPTLC3Q9NUV7 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SPTLC3Q9NUV7 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC19.38■□□□□ 0.69
SPTLC3Q9NUV7 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.38■□□□□ 0.69
SPTLC3Q9NUV7 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SPTLC3Q9NUV7 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SPTLC3Q9NUV7 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.38■□□□□ 0.69
SPTLC3Q9NUV7 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SPTLC3Q9NUV7 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SPTLC3Q9NUV7 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SPTLC3Q9NUV7 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SPTLC3Q9NUV7 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SPTLC3Q9NUV7 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SPTLC3Q9NUV7 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SPTLC3Q9NUV7 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.38■□□□□ 0.69
SPTLC3Q9NUV7 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.38■□□□□ 0.69
SPTLC3Q9NUV7 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC19.38■□□□□ 0.69
SPTLC3Q9NUV7 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.38■□□□□ 0.69
SPTLC3Q9NUV7 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SPTLC3Q9NUV7 AC016396.2-201ENST00000562575 1417 ntBASIC19.38■□□□□ 0.69
SPTLC3Q9NUV7 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.38■□□□□ 0.69
SPTLC3Q9NUV7 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SPTLC3Q9NUV7 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SPTLC3Q9NUV7 AP000525.1-201ENST00000608286 694 ntBASIC19.38■□□□□ 0.69
SPTLC3Q9NUV7 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC19.38■□□□□ 0.69
SPTLC3Q9NUV7 AC078925.2-201ENST00000624013 1973 ntBASIC19.38■□□□□ 0.69
SPTLC3Q9NUV7 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
SPTLC3Q9NUV7 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
SPTLC3Q9NUV7 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SPTLC3Q9NUV7 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SPTLC3Q9NUV7 RNF216P1-203ENST00000404404 2427 ntBASIC19.37■□□□□ 0.69
SPTLC3Q9NUV7 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
SPTLC3Q9NUV7 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPTLC3Q9NUV7 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
SPTLC3Q9NUV7 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPTLC3Q9NUV7 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.37■□□□□ 0.69
SPTLC3Q9NUV7 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPTLC3Q9NUV7 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SPTLC3Q9NUV7 AC092171.3-201ENST00000610122 2651 ntBASIC19.37■□□□□ 0.69
SPTLC3Q9NUV7 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPTLC3Q9NUV7 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.37■□□□□ 0.69
SPTLC3Q9NUV7 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.37■□□□□ 0.69
SPTLC3Q9NUV7 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.37■□□□□ 0.69
SPTLC3Q9NUV7 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPTLC3Q9NUV7 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.37■□□□□ 0.69
SPTLC3Q9NUV7 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.37■□□□□ 0.69
SPTLC3Q9NUV7 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms