Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRMT13Q9NUP7 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRMT13Q9NUP7 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TRMT13Q9NUP7 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.2■□□□□ 0.66
TRMT13Q9NUP7 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TRMT13Q9NUP7 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRMT13Q9NUP7 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TRMT13Q9NUP7 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRMT13Q9NUP7 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.2■□□□□ 0.66
TRMT13Q9NUP7 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRMT13Q9NUP7 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRMT13Q9NUP7 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRMT13Q9NUP7 WIZP1-201ENST00000531444 2299 ntBASIC19.2■□□□□ 0.66
TRMT13Q9NUP7 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.2■□□□□ 0.66
TRMT13Q9NUP7 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TRMT13Q9NUP7 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.2■□□□□ 0.66
TRMT13Q9NUP7 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
TRMT13Q9NUP7 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRMT13Q9NUP7 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRMT13Q9NUP7 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRMT13Q9NUP7 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.2■□□□□ 0.66
TRMT13Q9NUP7 CXCL1P1-201ENST00000502804 216 ntBASIC19.2■□□□□ 0.66
TRMT13Q9NUP7 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
TRMT13Q9NUP7 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.2■□□□□ 0.66
TRMT13Q9NUP7 AC011467.4-201ENST00000594891 528 ntBASIC19.2■□□□□ 0.66
TRMT13Q9NUP7 AL513210.1-201ENST00000629608 234 ntBASIC19.2■□□□□ 0.66
TRMT13Q9NUP7 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRMT13Q9NUP7 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRMT13Q9NUP7 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRMT13Q9NUP7 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRMT13Q9NUP7 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TRMT13Q9NUP7 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TRMT13Q9NUP7 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRMT13Q9NUP7 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
TRMT13Q9NUP7 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRMT13Q9NUP7 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.19■□□□□ 0.66
TRMT13Q9NUP7 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRMT13Q9NUP7 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.19■□□□□ 0.66
TRMT13Q9NUP7 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRMT13Q9NUP7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRMT13Q9NUP7 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
TRMT13Q9NUP7 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRMT13Q9NUP7 AC004461.1-201ENST00000412461 403 ntBASIC19.19■□□□□ 0.66
TRMT13Q9NUP7 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC19.19■□□□□ 0.66
TRMT13Q9NUP7 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRMT13Q9NUP7 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.19■□□□□ 0.66
TRMT13Q9NUP7 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.19■□□□□ 0.66
TRMT13Q9NUP7 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.19■□□□□ 0.66
TRMT13Q9NUP7 AC004835.2-201ENST00000603762 682 ntBASIC19.19■□□□□ 0.66
TRMT13Q9NUP7 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.19■□□□□ 0.66
TRMT13Q9NUP7 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.19■□□□□ 0.66
TRMT13Q9NUP7 AL020996.1-203ENST00000536896 2307 ntBASIC19.19■□□□□ 0.66
TRMT13Q9NUP7 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRMT13Q9NUP7 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRMT13Q9NUP7 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.19■□□□□ 0.66
TRMT13Q9NUP7 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.19■□□□□ 0.66
TRMT13Q9NUP7 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.19■□□□□ 0.66
TRMT13Q9NUP7 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TRMT13Q9NUP7 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
TRMT13Q9NUP7 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRMT13Q9NUP7 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.19■□□□□ 0.66
TRMT13Q9NUP7 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRMT13Q9NUP7 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRMT13Q9NUP7 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRMT13Q9NUP7 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.18■□□□□ 0.66
TRMT13Q9NUP7 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRMT13Q9NUP7 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRMT13Q9NUP7 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TRMT13Q9NUP7 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRMT13Q9NUP7 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.18■□□□□ 0.66
TRMT13Q9NUP7 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC19.18■□□□□ 0.66
TRMT13Q9NUP7 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRMT13Q9NUP7 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRMT13Q9NUP7 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRMT13Q9NUP7 AC002558.1-201ENST00000488906 803 ntBASIC19.18■□□□□ 0.66
TRMT13Q9NUP7 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC19.18■□□□□ 0.66
TRMT13Q9NUP7 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.18■□□□□ 0.66
TRMT13Q9NUP7 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC19.18■□□□□ 0.66
TRMT13Q9NUP7 AC004449.1-201ENST00000564240 433 ntBASIC19.18■□□□□ 0.66
TRMT13Q9NUP7 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.18■□□□□ 0.66
TRMT13Q9NUP7 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRMT13Q9NUP7 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.18■□□□□ 0.66
TRMT13Q9NUP7 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.18■□□□□ 0.66
TRMT13Q9NUP7 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRMT13Q9NUP7 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
TRMT13Q9NUP7 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
TRMT13Q9NUP7 AC105339.1-204ENST00000636249 355 ntBASIC19.18■□□□□ 0.66
TRMT13Q9NUP7 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRMT13Q9NUP7 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRMT13Q9NUP7 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.18■□□□□ 0.66
TRMT13Q9NUP7 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
TRMT13Q9NUP7 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
TRMT13Q9NUP7 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
TRMT13Q9NUP7 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.18■□□□□ 0.66
TRMT13Q9NUP7 AP000997.3-201ENST00000623333 2250 ntBASIC19.18■□□□□ 0.66
TRMT13Q9NUP7 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.18■□□□□ 0.66
TRMT13Q9NUP7 REXO1L9P-201ENST00000604264 2108 ntBASIC19.18■□□□□ 0.66
TRMT13Q9NUP7 AC092919.2-201ENST00000623631 1645 ntBASIC19.18■□□□□ 0.66
TRMT13Q9NUP7 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
TRMT13Q9NUP7 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms