Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SALL1Q9NSC2 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SALL1Q9NSC2 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SALL1Q9NSC2 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC21.16■□□□□ 0.98
SALL1Q9NSC2 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SALL1Q9NSC2 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SALL1Q9NSC2 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC21.16■□□□□ 0.98
SALL1Q9NSC2 AC006504.4-201ENST00000592118 1568 ntBASIC21.16■□□□□ 0.98
SALL1Q9NSC2 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SALL1Q9NSC2 AC026471.1-201ENST00000564629 3026 ntBASIC21.16■□□□□ 0.98
SALL1Q9NSC2 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SALL1Q9NSC2 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SALL1Q9NSC2 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SALL1Q9NSC2 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC21.16■□□□□ 0.98
SALL1Q9NSC2 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC21.16■□□□□ 0.98
SALL1Q9NSC2 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC21.16■□□□□ 0.98
SALL1Q9NSC2 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SALL1Q9NSC2 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SALL1Q9NSC2 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SALL1Q9NSC2 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
SALL1Q9NSC2 CRCP-205ENST00000431089 942 ntTSL 2 BASIC21.16■□□□□ 0.98
SALL1Q9NSC2 KRT18P3-201ENST00000451602 1288 ntBASIC21.16■□□□□ 0.98
SALL1Q9NSC2 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC21.16■□□□□ 0.98
SALL1Q9NSC2 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SALL1Q9NSC2 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC21.16■□□□□ 0.98
SALL1Q9NSC2 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC21.16■□□□□ 0.98
SALL1Q9NSC2 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SALL1Q9NSC2 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC21.16■□□□□ 0.98
SALL1Q9NSC2 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SALL1Q9NSC2 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
SALL1Q9NSC2 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SALL1Q9NSC2 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
SALL1Q9NSC2 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC21.16■□□□□ 0.98
SALL1Q9NSC2 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.16■□□□□ 0.98
SALL1Q9NSC2 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC21.16■□□□□ 0.98
SALL1Q9NSC2 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SALL1Q9NSC2 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SALL1Q9NSC2 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC21.15■□□□□ 0.98
SALL1Q9NSC2 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC21.15■□□□□ 0.98
SALL1Q9NSC2 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC21.15■□□□□ 0.98
SALL1Q9NSC2 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SALL1Q9NSC2 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SALL1Q9NSC2 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC21.15■□□□□ 0.98
SALL1Q9NSC2 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
SALL1Q9NSC2 BX842568.4-201ENST00000421222 227 ntBASIC21.15■□□□□ 0.98
SALL1Q9NSC2 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC21.15■□□□□ 0.98
SALL1Q9NSC2 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC21.15■□□□□ 0.98
SALL1Q9NSC2 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC21.15■□□□□ 0.98
SALL1Q9NSC2 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
SALL1Q9NSC2 AC139530.3-201ENST00000620344 690 ntBASIC21.15■□□□□ 0.98
SALL1Q9NSC2 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
SALL1Q9NSC2 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SALL1Q9NSC2 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC21.15■□□□□ 0.98
SALL1Q9NSC2 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SALL1Q9NSC2 EML3-217ENST00000531557 2509 ntTSL 5 BASIC21.15■□□□□ 0.98
SALL1Q9NSC2 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC21.15■□□□□ 0.98
SALL1Q9NSC2 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SALL1Q9NSC2 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
SALL1Q9NSC2 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
SALL1Q9NSC2 AC108751.1-201ENST00000490852 363 ntBASIC21.14■□□□□ 0.97
SALL1Q9NSC2 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
SALL1Q9NSC2 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC21.14■□□□□ 0.97
SALL1Q9NSC2 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC21.14■□□□□ 0.97
SALL1Q9NSC2 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC21.14■□□□□ 0.97
SALL1Q9NSC2 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SALL1Q9NSC2 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC21.14■□□□□ 0.97
SALL1Q9NSC2 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SALL1Q9NSC2 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SALL1Q9NSC2 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC21.14■□□□□ 0.97
SALL1Q9NSC2 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SALL1Q9NSC2 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SALL1Q9NSC2 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SALL1Q9NSC2 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SALL1Q9NSC2 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SALL1Q9NSC2 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC21.14■□□□□ 0.97
SALL1Q9NSC2 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.14■□□□□ 0.97
SALL1Q9NSC2 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SALL1Q9NSC2 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC21.14■□□□□ 0.97
SALL1Q9NSC2 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC21.14■□□□□ 0.97
SALL1Q9NSC2 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SALL1Q9NSC2 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SALL1Q9NSC2 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SALL1Q9NSC2 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
SALL1Q9NSC2 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SALL1Q9NSC2 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC21.13■□□□□ 0.97
SALL1Q9NSC2 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SALL1Q9NSC2 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SALL1Q9NSC2 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC21.13■□□□□ 0.97
SALL1Q9NSC2 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC21.13■□□□□ 0.97
SALL1Q9NSC2 HS6ST1P1-201ENST00000481504 1234 ntBASIC21.13■□□□□ 0.97
SALL1Q9NSC2 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC21.13■□□□□ 0.97
SALL1Q9NSC2 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC21.13■□□□□ 0.97
SALL1Q9NSC2 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC21.13■□□□□ 0.97
SALL1Q9NSC2 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SALL1Q9NSC2 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC21.13■□□□□ 0.97
SALL1Q9NSC2 AC134043.2-201ENST00000624206 2238 ntBASIC21.13■□□□□ 0.97
SALL1Q9NSC2 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SALL1Q9NSC2 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SALL1Q9NSC2 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC21.13■□□□□ 0.97
SALL1Q9NSC2 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms