Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TLR9Q9NR96 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TLR9Q9NR96 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TLR9Q9NR96 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
TLR9Q9NR96 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.59■□□□□ 0.57
TLR9Q9NR96 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TLR9Q9NR96 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TLR9Q9NR96 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TLR9Q9NR96 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TLR9Q9NR96 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TLR9Q9NR96 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TLR9Q9NR96 AC073592.3-201ENST00000625118 1834 ntBASIC18.59■□□□□ 0.57
TLR9Q9NR96 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TLR9Q9NR96 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TLR9Q9NR96 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TLR9Q9NR96 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TLR9Q9NR96 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
TLR9Q9NR96 MIR770-201ENST00000390219 98 ntBASIC18.59■□□□□ 0.57
TLR9Q9NR96 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.59■□□□□ 0.57
TLR9Q9NR96 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.59■□□□□ 0.57
TLR9Q9NR96 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.59■□□□□ 0.57
TLR9Q9NR96 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.59■□□□□ 0.57
TLR9Q9NR96 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.59■□□□□ 0.57
TLR9Q9NR96 FAM58CP-201ENST00000435741 640 ntBASIC18.59■□□□□ 0.57
TLR9Q9NR96 RHOQP3-201ENST00000437982 621 ntBASIC18.59■□□□□ 0.57
TLR9Q9NR96 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.59■□□□□ 0.57
TLR9Q9NR96 IGHV3-52-201ENST00000519770 353 ntBASIC18.59■□□□□ 0.57
TLR9Q9NR96 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
TLR9Q9NR96 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC18.59■□□□□ 0.57
TLR9Q9NR96 AC011467.4-201ENST00000594891 528 ntBASIC18.59■□□□□ 0.57
TLR9Q9NR96 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.59■□□□□ 0.57
TLR9Q9NR96 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TLR9Q9NR96 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TLR9Q9NR96 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TLR9Q9NR96 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.59■□□□□ 0.57
TLR9Q9NR96 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TLR9Q9NR96 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TLR9Q9NR96 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TLR9Q9NR96 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
TLR9Q9NR96 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TLR9Q9NR96 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
TLR9Q9NR96 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TLR9Q9NR96 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TLR9Q9NR96 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TLR9Q9NR96 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TLR9Q9NR96 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TLR9Q9NR96 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
TLR9Q9NR96 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
TLR9Q9NR96 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.58■□□□□ 0.57
TLR9Q9NR96 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
TLR9Q9NR96 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TLR9Q9NR96 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TLR9Q9NR96 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TLR9Q9NR96 TSEN15P1-201ENST00000423257 515 ntBASIC18.58■□□□□ 0.56
TLR9Q9NR96 AC074386.1-202ENST00000463561 864 ntBASIC18.58■□□□□ 0.56
TLR9Q9NR96 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.58■□□□□ 0.56
TLR9Q9NR96 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
TLR9Q9NR96 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18.58■□□□□ 0.56
TLR9Q9NR96 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.58■□□□□ 0.56
TLR9Q9NR96 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.58■□□□□ 0.56
TLR9Q9NR96 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.58■□□□□ 0.56
TLR9Q9NR96 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC18.58■□□□□ 0.56
TLR9Q9NR96 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.58■□□□□ 0.56
TLR9Q9NR96 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TLR9Q9NR96 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
TLR9Q9NR96 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TLR9Q9NR96 BX276092.7-203ENST00000637198 1536 ntBASIC18.58■□□□□ 0.56
TLR9Q9NR96 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TLR9Q9NR96 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TLR9Q9NR96 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TLR9Q9NR96 AC025580.3-201ENST00000617932 1424 ntBASIC18.57■□□□□ 0.56
TLR9Q9NR96 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TLR9Q9NR96 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TLR9Q9NR96 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.57■□□□□ 0.56
TLR9Q9NR96 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TLR9Q9NR96 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TLR9Q9NR96 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.57■□□□□ 0.56
TLR9Q9NR96 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TLR9Q9NR96 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TLR9Q9NR96 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TLR9Q9NR96 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TLR9Q9NR96 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TLR9Q9NR96 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TLR9Q9NR96 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TLR9Q9NR96 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TLR9Q9NR96 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TLR9Q9NR96 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TLR9Q9NR96 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.57■□□□□ 0.56
TLR9Q9NR96 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TLR9Q9NR96 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TLR9Q9NR96 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.57■□□□□ 0.56
TLR9Q9NR96 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.57■□□□□ 0.56
TLR9Q9NR96 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.57■□□□□ 0.56
TLR9Q9NR96 OR7E47P-204ENST00000575924 449 ntBASIC18.57■□□□□ 0.56
TLR9Q9NR96 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.57■□□□□ 0.56
TLR9Q9NR96 AL353135.1-201ENST00000606729 504 ntBASIC18.57■□□□□ 0.56
TLR9Q9NR96 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.57■□□□□ 0.56
TLR9Q9NR96 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TLR9Q9NR96 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.57■□□□□ 0.56
TLR9Q9NR96 AC093028.1-201ENST00000622998 982 ntBASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms