Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRDM9Q9NQV7 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.66■□□□□ 0.26
PRDM9Q9NQV7 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.66■□□□□ 0.26
PRDM9Q9NQV7 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
PRDM9Q9NQV7 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
PRDM9Q9NQV7 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.66■□□□□ 0.26
PRDM9Q9NQV7 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRDM9Q9NQV7 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PRDM9Q9NQV7 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.65■□□□□ 0.26
PRDM9Q9NQV7 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.65■□□□□ 0.26
PRDM9Q9NQV7 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.65■□□□□ 0.26
PRDM9Q9NQV7 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PRDM9Q9NQV7 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PRDM9Q9NQV7 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PRDM9Q9NQV7 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PRDM9Q9NQV7 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PRDM9Q9NQV7 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PRDM9Q9NQV7 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
PRDM9Q9NQV7 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRDM9Q9NQV7 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRDM9Q9NQV7 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRDM9Q9NQV7 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
PRDM9Q9NQV7 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRDM9Q9NQV7 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.65■□□□□ 0.26
PRDM9Q9NQV7 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.65■□□□□ 0.26
PRDM9Q9NQV7 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PRDM9Q9NQV7 IFNL4P1-201ENST00000607083 540 ntBASIC16.65■□□□□ 0.26
PRDM9Q9NQV7 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.65■□□□□ 0.26
PRDM9Q9NQV7 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PRDM9Q9NQV7 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.65■□□□□ 0.26
PRDM9Q9NQV7 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.65■□□□□ 0.26
PRDM9Q9NQV7 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.65■□□□□ 0.26
PRDM9Q9NQV7 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
PRDM9Q9NQV7 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRDM9Q9NQV7 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PRDM9Q9NQV7 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.65■□□□□ 0.26
PRDM9Q9NQV7 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRDM9Q9NQV7 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.65■□□□□ 0.26
PRDM9Q9NQV7 AL355312.1-201ENST00000407115 2176 ntBASIC16.65■□□□□ 0.26
PRDM9Q9NQV7 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PRDM9Q9NQV7 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.65■□□□□ 0.26
PRDM9Q9NQV7 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.65■□□□□ 0.26
PRDM9Q9NQV7 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRDM9Q9NQV7 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.65■□□□□ 0.26
PRDM9Q9NQV7 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.65■□□□□ 0.26
PRDM9Q9NQV7 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
PRDM9Q9NQV7 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
PRDM9Q9NQV7 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
PRDM9Q9NQV7 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
PRDM9Q9NQV7 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PRDM9Q9NQV7 AC067852.2-201ENST00000590513 2313 ntBASIC16.64■□□□□ 0.25
PRDM9Q9NQV7 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRDM9Q9NQV7 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRDM9Q9NQV7 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.64■□□□□ 0.25
PRDM9Q9NQV7 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.64■□□□□ 0.25
PRDM9Q9NQV7 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PRDM9Q9NQV7 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRDM9Q9NQV7 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRDM9Q9NQV7 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.64■□□□□ 0.25
PRDM9Q9NQV7 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.64■□□□□ 0.25
PRDM9Q9NQV7 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.64■□□□□ 0.25
PRDM9Q9NQV7 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.64■□□□□ 0.25
PRDM9Q9NQV7 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.64■□□□□ 0.25
PRDM9Q9NQV7 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRDM9Q9NQV7 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.64■□□□□ 0.25
PRDM9Q9NQV7 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PRDM9Q9NQV7 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.64■□□□□ 0.25
PRDM9Q9NQV7 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.64■□□□□ 0.25
PRDM9Q9NQV7 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRDM9Q9NQV7 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.64■□□□□ 0.25
PRDM9Q9NQV7 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRDM9Q9NQV7 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.64■□□□□ 0.25
PRDM9Q9NQV7 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PRDM9Q9NQV7 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PRDM9Q9NQV7 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRDM9Q9NQV7 HTR7P1-202ENST00000624664 4411 ntBASIC16.64■□□□□ 0.25
PRDM9Q9NQV7 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.64■□□□□ 0.25
PRDM9Q9NQV7 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
PRDM9Q9NQV7 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRDM9Q9NQV7 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRDM9Q9NQV7 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PRDM9Q9NQV7 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
PRDM9Q9NQV7 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.63■□□□□ 0.25
PRDM9Q9NQV7 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.63■□□□□ 0.25
PRDM9Q9NQV7 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRDM9Q9NQV7 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.63■□□□□ 0.25
PRDM9Q9NQV7 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.63■□□□□ 0.25
PRDM9Q9NQV7 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PRDM9Q9NQV7 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.63■□□□□ 0.25
PRDM9Q9NQV7 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PRDM9Q9NQV7 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRDM9Q9NQV7 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.63■□□□□ 0.25
PRDM9Q9NQV7 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.63■□□□□ 0.25
PRDM9Q9NQV7 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.63■□□□□ 0.25
PRDM9Q9NQV7 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.63■□□□□ 0.25
PRDM9Q9NQV7 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRDM9Q9NQV7 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.63■□□□□ 0.25
PRDM9Q9NQV7 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PRDM9Q9NQV7 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRDM9Q9NQV7 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms