Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NLRC4Q9NPP4 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
NLRC4Q9NPP4 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC19.11■□□□□ 0.65
NLRC4Q9NPP4 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NLRC4Q9NPP4 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.11■□□□□ 0.65
NLRC4Q9NPP4 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NLRC4Q9NPP4 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NLRC4Q9NPP4 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NLRC4Q9NPP4 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
NLRC4Q9NPP4 AC104076.2-201ENST00000448912 469 ntBASIC19.11■□□□□ 0.65
NLRC4Q9NPP4 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NLRC4Q9NPP4 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.11■□□□□ 0.65
NLRC4Q9NPP4 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.11■□□□□ 0.65
NLRC4Q9NPP4 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NLRC4Q9NPP4 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.11■□□□□ 0.65
NLRC4Q9NPP4 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.11■□□□□ 0.65
NLRC4Q9NPP4 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
NLRC4Q9NPP4 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NLRC4Q9NPP4 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
NLRC4Q9NPP4 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NLRC4Q9NPP4 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
NLRC4Q9NPP4 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NLRC4Q9NPP4 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NLRC4Q9NPP4 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NLRC4Q9NPP4 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
NLRC4Q9NPP4 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NLRC4Q9NPP4 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NLRC4Q9NPP4 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NLRC4Q9NPP4 LYSMD4-203ENST00000378904 2122 ntBASIC19.1■□□□□ 0.65
NLRC4Q9NPP4 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.1■□□□□ 0.65
NLRC4Q9NPP4 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NLRC4Q9NPP4 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NLRC4Q9NPP4 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NLRC4Q9NPP4 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.1■□□□□ 0.65
NLRC4Q9NPP4 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
NLRC4Q9NPP4 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
NLRC4Q9NPP4 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NLRC4Q9NPP4 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NLRC4Q9NPP4 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.1■□□□□ 0.65
NLRC4Q9NPP4 AC092647.4-201ENST00000457211 535 ntBASIC19.1■□□□□ 0.65
NLRC4Q9NPP4 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.1■□□□□ 0.65
NLRC4Q9NPP4 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.1■□□□□ 0.65
NLRC4Q9NPP4 AL390719.2-201ENST00000606993 987 ntBASIC19.1■□□□□ 0.65
NLRC4Q9NPP4 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NLRC4Q9NPP4 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NLRC4Q9NPP4 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.1■□□□□ 0.65
NLRC4Q9NPP4 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NLRC4Q9NPP4 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NLRC4Q9NPP4 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NLRC4Q9NPP4 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NLRC4Q9NPP4 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NLRC4Q9NPP4 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.1■□□□□ 0.65
NLRC4Q9NPP4 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NLRC4Q9NPP4 Z83836.1-201ENST00000624605 1642 ntBASIC19.1■□□□□ 0.65
NLRC4Q9NPP4 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NLRC4Q9NPP4 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.1■□□□□ 0.65
NLRC4Q9NPP4 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NLRC4Q9NPP4 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
NLRC4Q9NPP4 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NLRC4Q9NPP4 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
NLRC4Q9NPP4 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
NLRC4Q9NPP4 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.09■□□□□ 0.65
NLRC4Q9NPP4 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.09■□□□□ 0.65
NLRC4Q9NPP4 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NLRC4Q9NPP4 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NLRC4Q9NPP4 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NLRC4Q9NPP4 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NLRC4Q9NPP4 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NLRC4Q9NPP4 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
NLRC4Q9NPP4 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NLRC4Q9NPP4 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NLRC4Q9NPP4 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NLRC4Q9NPP4 SPDYE13P-201ENST00000445314 798 ntBASIC19.09■□□□□ 0.65
NLRC4Q9NPP4 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.09■□□□□ 0.65
NLRC4Q9NPP4 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NLRC4Q9NPP4 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.09■□□□□ 0.65
NLRC4Q9NPP4 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.09■□□□□ 0.65
NLRC4Q9NPP4 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.09■□□□□ 0.65
NLRC4Q9NPP4 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.09■□□□□ 0.65
NLRC4Q9NPP4 LINC01023-201ENST00000606054 436 ntBASIC19.09■□□□□ 0.65
NLRC4Q9NPP4 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.09■□□□□ 0.65
NLRC4Q9NPP4 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NLRC4Q9NPP4 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NLRC4Q9NPP4 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NLRC4Q9NPP4 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
NLRC4Q9NPP4 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NLRC4Q9NPP4 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
NLRC4Q9NPP4 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
NLRC4Q9NPP4 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NLRC4Q9NPP4 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
NLRC4Q9NPP4 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NLRC4Q9NPP4 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NLRC4Q9NPP4 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NLRC4Q9NPP4 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
NLRC4Q9NPP4 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.09■□□□□ 0.65
NLRC4Q9NPP4 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NLRC4Q9NPP4 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NLRC4Q9NPP4 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NLRC4Q9NPP4 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NLRC4Q9NPP4 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms