Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC15.07■□□□□ 0
GCM1Q9NP62 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
GCM1Q9NP62 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
GCM1Q9NP62 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.07■□□□□ 0
GCM1Q9NP62 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
GCM1Q9NP62 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.07■□□□□ 0
GCM1Q9NP62 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.07■□□□□ 0
GCM1Q9NP62 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
GCM1Q9NP62 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
GCM1Q9NP62 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
GCM1Q9NP62 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.07■□□□□ 0
GCM1Q9NP62 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
GCM1Q9NP62 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
GCM1Q9NP62 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
GCM1Q9NP62 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.07■□□□□ 0
GCM1Q9NP62 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.07■□□□□ 0
GCM1Q9NP62 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC15.07■□□□□ 0
GCM1Q9NP62 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
GCM1Q9NP62 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.07■□□□□ 0
GCM1Q9NP62 PRELID1P1-202ENST00000567272 903 ntBASIC15.07■□□□□ 0
GCM1Q9NP62 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.07■□□□□ 0
GCM1Q9NP62 AC099336.1-202ENST00000602961 463 ntBASIC15.07■□□□□ 0
GCM1Q9NP62 AC116407.2-201ENST00000613639 860 ntBASIC15.07■□□□□ 0
GCM1Q9NP62 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.07■□□□□ 0
GCM1Q9NP62 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
GCM1Q9NP62 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.07■□□□□ 0
GCM1Q9NP62 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.07■□□□□ 0
GCM1Q9NP62 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC15.07■□□□□ 0
GCM1Q9NP62 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
GCM1Q9NP62 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
GCM1Q9NP62 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.07■□□□□ 0
GCM1Q9NP62 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15.07■□□□□ 0
GCM1Q9NP62 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
GCM1Q9NP62 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
GCM1Q9NP62 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
GCM1Q9NP62 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC15.07■□□□□ 0
GCM1Q9NP62 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.07■□□□□ 0
GCM1Q9NP62 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
GCM1Q9NP62 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
GCM1Q9NP62 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.06■□□□□ 0
GCM1Q9NP62 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
GCM1Q9NP62 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
GCM1Q9NP62 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
GCM1Q9NP62 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC15.06■□□□□ 0
GCM1Q9NP62 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
GCM1Q9NP62 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC15.06■□□□□ 0
GCM1Q9NP62 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.06■□□□□ 0
GCM1Q9NP62 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC15.06■□□□□ 0
GCM1Q9NP62 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.06■□□□□ 0
GCM1Q9NP62 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
GCM1Q9NP62 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
GCM1Q9NP62 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
GCM1Q9NP62 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.06■□□□□ 0
GCM1Q9NP62 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
GCM1Q9NP62 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.06■□□□□ 0
GCM1Q9NP62 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.06■□□□□ 0
GCM1Q9NP62 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.06■□□□□ 0
GCM1Q9NP62 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.06■□□□□ 0
GCM1Q9NP62 AC009533.2-201ENST00000543664 586 ntBASIC15.06■□□□□ 0
GCM1Q9NP62 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.06■□□□□ 0
GCM1Q9NP62 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.06■□□□□ 0
GCM1Q9NP62 AC097374.2-201ENST00000618617 1306 ntBASIC15.06■□□□□ 0
GCM1Q9NP62 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
GCM1Q9NP62 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
GCM1Q9NP62 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC15.06■□□□□ 0
GCM1Q9NP62 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.06■□□□□ 0
GCM1Q9NP62 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
GCM1Q9NP62 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
GCM1Q9NP62 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
GCM1Q9NP62 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.06■□□□□ 0
GCM1Q9NP62 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
GCM1Q9NP62 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
GCM1Q9NP62 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
GCM1Q9NP62 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.06■□□□□ 0
GCM1Q9NP62 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.06■□□□□ 0
GCM1Q9NP62 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
GCM1Q9NP62 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.06■□□□□ 0
GCM1Q9NP62 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.06■□□□□ 0
GCM1Q9NP62 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.06■□□□□ 0
GCM1Q9NP62 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
GCM1Q9NP62 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.05■□□□□ 0
GCM1Q9NP62 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
GCM1Q9NP62 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC15.05■□□□□ 0
GCM1Q9NP62 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
GCM1Q9NP62 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC15.05■□□□□ 0
GCM1Q9NP62 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC15.05■□□□□ 0
GCM1Q9NP62 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
GCM1Q9NP62 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
GCM1Q9NP62 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ 0
GCM1Q9NP62 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
GCM1Q9NP62 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
GCM1Q9NP62 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.05■□□□□ -0
GCM1Q9NP62 AC096633.1-201ENST00000422446 749 ntBASIC15.05■□□□□ -0
GCM1Q9NP62 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.05■□□□□ -0
GCM1Q9NP62 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.05■□□□□ -0
GCM1Q9NP62 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.05■□□□□ -0
GCM1Q9NP62 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.05■□□□□ -0
GCM1Q9NP62 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.05■□□□□ -0
GCM1Q9NP62 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.05■□□□□ -0
GCM1Q9NP62 FOSL1P1-201ENST00000511041 816 ntBASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms