Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NEUROD4Q9HD90 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NEUROD4Q9HD90 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.66■□□□□ 0.26
NEUROD4Q9HD90 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NEUROD4Q9HD90 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NEUROD4Q9HD90 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
NEUROD4Q9HD90 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.66■□□□□ 0.26
NEUROD4Q9HD90 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
NEUROD4Q9HD90 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.65■□□□□ 0.26
NEUROD4Q9HD90 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.65■□□□□ 0.26
NEUROD4Q9HD90 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
NEUROD4Q9HD90 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NEUROD4Q9HD90 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
NEUROD4Q9HD90 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.65■□□□□ 0.26
NEUROD4Q9HD90 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
NEUROD4Q9HD90 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NEUROD4Q9HD90 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
NEUROD4Q9HD90 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
NEUROD4Q9HD90 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NEUROD4Q9HD90 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NEUROD4Q9HD90 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NEUROD4Q9HD90 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NEUROD4Q9HD90 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NEUROD4Q9HD90 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NEUROD4Q9HD90 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NEUROD4Q9HD90 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NEUROD4Q9HD90 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.65■□□□□ 0.26
NEUROD4Q9HD90 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
NEUROD4Q9HD90 AC083849.1-201ENST00000615227 514 ntBASIC16.65■□□□□ 0.26
NEUROD4Q9HD90 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.65■□□□□ 0.26
NEUROD4Q9HD90 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.65■□□□□ 0.26
NEUROD4Q9HD90 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.65■□□□□ 0.26
NEUROD4Q9HD90 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NEUROD4Q9HD90 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
NEUROD4Q9HD90 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NEUROD4Q9HD90 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.65■□□□□ 0.26
NEUROD4Q9HD90 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
NEUROD4Q9HD90 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
NEUROD4Q9HD90 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
NEUROD4Q9HD90 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
NEUROD4Q9HD90 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NEUROD4Q9HD90 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.64■□□□□ 0.25
NEUROD4Q9HD90 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NEUROD4Q9HD90 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
NEUROD4Q9HD90 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NEUROD4Q9HD90 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
NEUROD4Q9HD90 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NEUROD4Q9HD90 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NEUROD4Q9HD90 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NEUROD4Q9HD90 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.64■□□□□ 0.25
NEUROD4Q9HD90 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.64■□□□□ 0.25
NEUROD4Q9HD90 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NEUROD4Q9HD90 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NEUROD4Q9HD90 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.64■□□□□ 0.25
NEUROD4Q9HD90 AL671277.2-201ENST00000458060 996 ntBASIC16.64■□□□□ 0.25
NEUROD4Q9HD90 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.64■□□□□ 0.25
NEUROD4Q9HD90 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.64■□□□□ 0.25
NEUROD4Q9HD90 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
NEUROD4Q9HD90 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.64■□□□□ 0.25
NEUROD4Q9HD90 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.64■□□□□ 0.25
NEUROD4Q9HD90 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.64■□□□□ 0.25
NEUROD4Q9HD90 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.64■□□□□ 0.25
NEUROD4Q9HD90 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.64■□□□□ 0.25
NEUROD4Q9HD90 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
NEUROD4Q9HD90 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.64■□□□□ 0.25
NEUROD4Q9HD90 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.64■□□□□ 0.25
NEUROD4Q9HD90 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
NEUROD4Q9HD90 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NEUROD4Q9HD90 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NEUROD4Q9HD90 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
NEUROD4Q9HD90 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.64■□□□□ 0.25
NEUROD4Q9HD90 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NEUROD4Q9HD90 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NEUROD4Q9HD90 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NEUROD4Q9HD90 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.64■□□□□ 0.25
NEUROD4Q9HD90 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.64■□□□□ 0.25
NEUROD4Q9HD90 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NEUROD4Q9HD90 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NEUROD4Q9HD90 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.64■□□□□ 0.25
NEUROD4Q9HD90 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NEUROD4Q9HD90 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NEUROD4Q9HD90 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.64■□□□□ 0.25
NEUROD4Q9HD90 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NEUROD4Q9HD90 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NEUROD4Q9HD90 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NEUROD4Q9HD90 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
NEUROD4Q9HD90 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NEUROD4Q9HD90 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.63■□□□□ 0.25
NEUROD4Q9HD90 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
NEUROD4Q9HD90 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
NEUROD4Q9HD90 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NEUROD4Q9HD90 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
NEUROD4Q9HD90 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NEUROD4Q9HD90 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
NEUROD4Q9HD90 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
NEUROD4Q9HD90 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
NEUROD4Q9HD90 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NEUROD4Q9HD90 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NEUROD4Q9HD90 AL031133.1-201ENST00000406807 723 ntBASIC16.63■□□□□ 0.25
NEUROD4Q9HD90 AL645929.1-201ENST00000420084 975 ntBASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms